BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037697
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836101.1| photosystem I assembly protein ycf4 [Megaler...   183   1e-44
ref|NP_862765.1| photosystem I assembly protein Ycf4 [Calycanthu...   183   1e-44
ref|YP_007476058.1| photosystem I assembly protein ycf4 [Dasypog...   182   3e-44
gb|AFM83304.1| photosystem I assembly protein ycf4 (chloroplast)...   180   9e-44
gb|AEJ10251.1| photosystem I assembly protein ycf4 [Kingia austr...   180   9e-44

>ref|YP_002836101.1| photosystem I assembly protein ycf4 [Megaleranthis saniculifolia]
           gi|226933893|gb|ACO92026.1| photosystem I assembly
           protein ycf4 [Megaleranthis saniculifolia]
          Length = 184

 Score =  183 bits (465), Expect = 1e-44
 Identities = 87/105 (82%), Positives = 88/105 (83%)
 Frame = +3

Query: 93  MNWRSERIWIELIAGSRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISLFPSQQIIFF 272
           MNWRSERIWIELI GSRKTSNFCWACI               YLGRNLISLFPSQQI+FF
Sbjct: 1   MNWRSERIWIELIPGSRKTSNFCWACILFLGSLGFLLVGTSSYLGRNLISLFPSQQILFF 60

Query: 273 PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRSDRKKGIVCIF 407
           PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDR DRKKGIVCIF
Sbjct: 61  PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKKGIVCIF 105


>ref|NP_862765.1| photosystem I assembly protein Ycf4 [Calycanthus floridus var.
           glaucus] gi|51316798|sp|Q7YJW2.1|YCF4_CALFG RecName:
           Full=Photosystem I assembly protein Ycf4
           gi|32399390|emb|CAD28732.1| Ycf4 protein [Calycanthus
           floridus var. glaucus]
          Length = 184

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/105 (82%), Positives = 88/105 (83%)
 Frame = +3

Query: 93  MNWRSERIWIELIAGSRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISLFPSQQIIFF 272
           MNWRSERIWIELI GSRKTSNFCWACI               YLGRNLISLFPSQQIIFF
Sbjct: 1   MNWRSERIWIELITGSRKTSNFCWACILFLGSLGFLLVGTSSYLGRNLISLFPSQQIIFF 60

Query: 273 PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRSDRKKGIVCIF 407
           PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDR DRK+GIVCIF
Sbjct: 61  PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIF 105


>ref|YP_007476058.1| photosystem I assembly protein ycf4 [Dasypogon bromeliifolius]
           gi|338826174|gb|AEJ10240.1| photosystem I assembly
           protein ycf4 [Dasypogon bromeliifolius]
           gi|449326542|gb|AGE93123.1| photosystem I assembly
           protein ycf4 [Dasypogon bromeliifolius]
          Length = 184

 Score =  182 bits (461), Expect = 3e-44
 Identities = 86/105 (81%), Positives = 88/105 (83%)
 Frame = +3

Query: 93  MNWRSERIWIELIAGSRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISLFPSQQIIFF 272
           MNWRSERIWIELI GSRKTSNFCWACI               YLGRNLIS+FPSQQIIFF
Sbjct: 1   MNWRSERIWIELITGSRKTSNFCWACILFLGSLGFLVVGISSYLGRNLISVFPSQQIIFF 60

Query: 273 PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRSDRKKGIVCIF 407
           PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDR DRK+GIVCIF
Sbjct: 61  PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIF 105


>gb|AFM83304.1| photosystem I assembly protein ycf4 (chloroplast) [Kingia
           australis]
          Length = 184

 Score =  180 bits (457), Expect = 9e-44
 Identities = 85/105 (80%), Positives = 87/105 (82%)
 Frame = +3

Query: 93  MNWRSERIWIELIAGSRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISLFPSQQIIFF 272
           MNWRSE IWIELI GSRKTSNFCWACI               YLGRNLIS+FPSQQIIFF
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISIFPSQQIIFF 60

Query: 273 PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRSDRKKGIVCIF 407
           PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDR DRK+GIVCIF
Sbjct: 61  PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIF 105


>gb|AEJ10251.1| photosystem I assembly protein ycf4 [Kingia australis]
          Length = 183

 Score =  180 bits (457), Expect = 9e-44
 Identities = 85/105 (80%), Positives = 87/105 (82%)
 Frame = +3

Query: 93  MNWRSERIWIELIAGSRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISLFPSQQIIFF 272
           MNWRSE IWIELI GSRKTSNFCWACI               YLGRNLIS+FPSQQIIFF
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISIFPSQQIIFF 60

Query: 273 PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRSDRKKGIVCIF 407
           PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDR DRK+GIVCIF
Sbjct: 61  PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIF 105