BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037678
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containi...   187   6e-46
emb|CBI24234.3| unnamed protein product [Vitis vinifera]              187   6e-46
emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]   187   6e-46
ref|XP_002299984.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
ref|XP_003617310.1| Pentatricopeptide repeat-containing protein ...   174   5e-42

>ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  187 bits (476), Expect = 6e-46
 Identities = 85/124 (68%), Positives = 106/124 (85%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           RKLRE  EAFR+LKS+G  V IN CNSLLGGLVKV W+D+AWEIY+E+V SG +VNVYTL
Sbjct: 198 RKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTL 257

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           NIM+NA+CK  K++N   +L++MEE+G+FPD+VTYNTLINAYCR+GLLEEAF+L + MS 
Sbjct: 258 NIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG 317

Query: 13  KGFE 2
           KG +
Sbjct: 318 KGLK 321



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLL-GGLVKVDWIDMAWEIYREMVGSGTEVNVYTLN 191
           L +A + FR +K+ G + P N   ++L GG  +   +  A ++  EM+  G  ++V T N
Sbjct: 410 LDQALKYFRDMKNAG-LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 468

Query: 190 IMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIM 20
            ++N +CKE  +  A    TEM ERG+FPD  T+ TLIN Y ++G + +A  L  +M
Sbjct: 469 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 525



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = -2

Query: 355 SEAFRI---LKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIM 185
           SEA ++   +  +G ++ +   N++L GL K   +  A E++ EM   G   + YT   +
Sbjct: 446 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 505

Query: 184 VNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAK 11
           +N   K+G +  AV     M +R + PD+VTYNTLI+ +C+   +E+  +L N M ++
Sbjct: 506 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 563



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/98 (33%), Positives = 61/98 (62%)
 Frame = -2

Query: 298 NSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMVNAMCKEGKVKNAVVYLTEMEE 119
           N+L+ G +K + +D A+ +  +M  SG   +V T N+++N   ++G+++ A + + +M E
Sbjct: 643 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 702

Query: 118 RGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKGF 5
           RG+ PD  TY +LIN +  +  L+EAF + + M  +GF
Sbjct: 703 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 740



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/120 (30%), Positives = 65/120 (54%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNI 188
           + +A   F  + S+G +  +   ++L+G L K   +D A + +R+M  +G   +     I
Sbjct: 375 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 434

Query: 187 MVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           ++   C+ G +  A+    EM E+G   D+VTYNT++N  C+E +L EA +L   M+ +G
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/95 (35%), Positives = 51/95 (53%)
 Frame = -2

Query: 292 LLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMVNAMCKEGKVKNAVVYLTEMEERG 113
           L+ G   +  +  A+ ++ EMV  G E  + T N +V   C+ G    A  +L+ M  +G
Sbjct: 575 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 634

Query: 112 IFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           I PD +TYNTLIN + +E  ++ AF L N M   G
Sbjct: 635 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 669



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/124 (29%), Positives = 61/124 (49%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           + L EA E F  +  RG         +L+ G  K   ++ A  ++  M+    + +V T 
Sbjct: 478 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTY 537

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           N +++  CK  +++       +M  R I+P+ ++Y  LIN YC  G + EAF L + M  
Sbjct: 538 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 597

Query: 13  KGFE 2
           KGFE
Sbjct: 598 KGFE 601



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = -2

Query: 355 SEAFRI---LKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIM 185
           SEAFR+   +  +GF   I  CN+++ G  +      A E    M+  G   +  T N +
Sbjct: 586 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 645

Query: 184 VNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEA 41
           +N   KE  +  A   + +ME  G+ PD++TYN ++N + R+G ++EA
Sbjct: 646 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 693



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/122 (27%), Positives = 60/122 (49%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           +K+         ++ +G    +   N+L+    +   ++ A+E+   M G G +  V+T 
Sbjct: 268 QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTY 327

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           N ++N +CK GK   A   L EM + G+ PD  TYN L+   CR   + +A  + + M +
Sbjct: 328 NAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS 387

Query: 13  KG 8
           +G
Sbjct: 388 QG 389



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/120 (26%), Positives = 55/120 (45%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNI 188
           + +A   F ++  R     +   N+L+ G  K   ++   E++ +M+      N  +  I
Sbjct: 515 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 574

Query: 187 MVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           ++N  C  G V  A     EM E+G    I+T NT++  YCR G   +A +  + M  KG
Sbjct: 575 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 634


>emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  187 bits (476), Expect = 6e-46
 Identities = 85/124 (68%), Positives = 106/124 (85%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           RKLRE  EAFR+LKS+G  V IN CNSLLGGLVKV W+D+AWEIY+E+V SG +VNVYTL
Sbjct: 41  RKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTL 100

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           NIM+NA+CK  K++N   +L++MEE+G+FPD+VTYNTLINAYCR+GLLEEAF+L + MS 
Sbjct: 101 NIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG 160

Query: 13  KGFE 2
           KG +
Sbjct: 161 KGLK 164



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLL-GGLVKVDWIDMAWEIYREMVGSGTEVNVYTLN 191
           L +A + FR +K+ G + P N   ++L GG  +   +  A ++  EM+  G  ++V T N
Sbjct: 253 LDQALKYFRDMKNAG-LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 311

Query: 190 IMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIM 20
            ++N +CKE  +  A    TEM ERG+FPD  T+ TLIN Y ++G + +A  L  +M
Sbjct: 312 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = -2

Query: 355 SEAFRI---LKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIM 185
           SEA ++   +  +G ++ +   N++L GL K   +  A E++ EM   G   + YT   +
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 348

Query: 184 VNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAK 11
           +N   K+G +  AV     M +R + PD+VTYNTLI+ +C+   +E+  +L N M ++
Sbjct: 349 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 406



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/98 (33%), Positives = 61/98 (62%)
 Frame = -2

Query: 298 NSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMVNAMCKEGKVKNAVVYLTEMEE 119
           N+L+ G +K + +D A+ +  +M  SG   +V T N+++N   ++G+++ A + + +M E
Sbjct: 486 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 545

Query: 118 RGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKGF 5
           RG+ PD  TY +LIN +  +  L+EAF + + M  +GF
Sbjct: 546 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 583



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/120 (30%), Positives = 65/120 (54%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNI 188
           + +A   F  + S+G +  +   ++L+G L K   +D A + +R+M  +G   +     I
Sbjct: 218 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 277

Query: 187 MVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           ++   C+ G +  A+    EM E+G   D+VTYNT++N  C+E +L EA +L   M+ +G
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/95 (35%), Positives = 51/95 (53%)
 Frame = -2

Query: 292 LLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMVNAMCKEGKVKNAVVYLTEMEERG 113
           L+ G   +  +  A+ ++ EMV  G E  + T N +V   C+ G    A  +L+ M  +G
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477

Query: 112 IFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           I PD +TYNTLIN + +E  ++ AF L N M   G
Sbjct: 478 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 512



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/124 (29%), Positives = 61/124 (49%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           + L EA E F  +  RG         +L+ G  K   ++ A  ++  M+    + +V T 
Sbjct: 321 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTY 380

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           N +++  CK  +++       +M  R I+P+ ++Y  LIN YC  G + EAF L + M  
Sbjct: 381 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 440

Query: 13  KGFE 2
           KGFE
Sbjct: 441 KGFE 444



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = -2

Query: 355 SEAFRI---LKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIM 185
           SEAFR+   +  +GF   I  CN+++ G  +      A E    M+  G   +  T N +
Sbjct: 429 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 488

Query: 184 VNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEA 41
           +N   KE  +  A   + +ME  G+ PD++TYN ++N + R+G ++EA
Sbjct: 489 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 536



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/122 (27%), Positives = 60/122 (49%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           +K+         ++ +G    +   N+L+    +   ++ A+E+   M G G +  V+T 
Sbjct: 111 QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTY 170

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           N ++N +CK GK   A   L EM + G+ PD  TYN L+   CR   + +A  + + M +
Sbjct: 171 NAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS 230

Query: 13  KG 8
           +G
Sbjct: 231 QG 232



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/120 (26%), Positives = 55/120 (45%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNI 188
           + +A   F ++  R     +   N+L+ G  K   ++   E++ +M+      N  +  I
Sbjct: 358 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 417

Query: 187 MVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           ++N  C  G V  A     EM E+G    I+T NT++  YCR G   +A +  + M  KG
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477


>emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  187 bits (476), Expect = 6e-46
 Identities = 85/124 (68%), Positives = 106/124 (85%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           RKLRE  EAFR+LKS+G  V IN CNSLLGGLVKV W+D+AWEIY+E+V SG +VNVYTL
Sbjct: 302 RKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTL 361

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           NIM+NA+CK  K++N   +L++MEE+G+FPD+VTYNTLINAYCR+GLLEEAF+L + MS 
Sbjct: 362 NIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG 421

Query: 13  KGFE 2
           KG +
Sbjct: 422 KGLK 425



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLL-GGLVKVDWIDMAWEIYREMVGSGTEVNVYTLN 191
           L +A + FR +K+ G + P N   ++L GG  +   +  A ++  EM+  G  ++V T N
Sbjct: 514 LDQALKYFRDMKNAG-LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYN 572

Query: 190 IMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIM 20
            ++N +CKE  +  A    TEM ERG+FPD  T+ TLIN Y ++G + +A  L  +M
Sbjct: 573 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
 Frame = -2

Query: 355 SEAFRI---LKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIM 185
           SEA ++   +  +G  + +   N++L GL K   +  A E++ EM   G   + YT   +
Sbjct: 550 SEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 609

Query: 184 VNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAK 11
           +N   K+G +  AV     M +R + PD+VTYNTLI+ +C+   +E+  +L N M ++
Sbjct: 610 INGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 667



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/98 (33%), Positives = 61/98 (62%)
 Frame = -2

Query: 298  NSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMVNAMCKEGKVKNAVVYLTEMEE 119
            N+L+ G +K + +D A+ +  +M  SG   +V T N+++N   ++G+++ A + + +M E
Sbjct: 747  NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 806

Query: 118  RGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKGF 5
            RG+ PD  TY +LIN +  +  L+EAF + + M  +GF
Sbjct: 807  RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 844



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/120 (30%), Positives = 65/120 (54%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNI 188
           + +A   F  + S+G +  +   ++L+G L K   +D A + +R+M  +G   +     I
Sbjct: 479 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 538

Query: 187 MVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           ++   C+ G +  A+    EM E+G   D+VTYNT++N  C+E +L EA +L   M+ +G
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/95 (35%), Positives = 51/95 (53%)
 Frame = -2

Query: 292 LLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMVNAMCKEGKVKNAVVYLTEMEERG 113
           L+ G   +  +  A+ ++ EMV  G E  + T N +V   C+ G    A  +L+ M  +G
Sbjct: 679 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 738

Query: 112 IFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           I PD +TYNTLIN + +E  ++ AF L N M   G
Sbjct: 739 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 773



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/124 (29%), Positives = 61/124 (49%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           + L EA E F  +  RG         +L+ G  K   ++ A  ++  M+    + +V T 
Sbjct: 582 KMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTY 641

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           N +++  CK  +++       +M  R I+P+ ++Y  LIN YC  G + EAF L + M  
Sbjct: 642 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 701

Query: 13  KGFE 2
           KGFE
Sbjct: 702 KGFE 705



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = -2

Query: 355  SEAFRI---LKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIM 185
            SEAFR+   +  +GF   I  CN+++ G  +      A E    M+  G   +  T N +
Sbjct: 690  SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 749

Query: 184  VNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEA 41
            +N   KE  +  A   + +ME  G+ PD++TYN ++N + R+G ++EA
Sbjct: 750  INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 797



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/122 (27%), Positives = 60/122 (49%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           +K+         ++ +G    +   N+L+    +   ++ A+E+   M G G +  V+T 
Sbjct: 372 QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTY 431

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           N ++N +CK GK   A   L EM + G+ PD  TYN L+   CR   + +A  + + M +
Sbjct: 432 NAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS 491

Query: 13  KG 8
           +G
Sbjct: 492 QG 493



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/120 (26%), Positives = 55/120 (45%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNI 188
           + +A   F ++  R     +   N+L+ G  K   ++   E++ +M+      N  +  I
Sbjct: 619 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 678

Query: 187 MVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           ++N  C  G V  A     EM E+G    I+T NT++  YCR G   +A +  + M  KG
Sbjct: 679 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 738


>ref|XP_002299984.1| predicted protein [Populus trichocarpa] gi|222847242|gb|EEE84789.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/124 (66%), Positives = 106/124 (85%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           RKLRE +EAFRIL+S+G++V IN CNSLLGGLVK+DW+++AWE++RE+V SG E+NVYTL
Sbjct: 62  RKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTL 121

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           NIMVNA+CK+GK  +   +L+EME  GI+ D+VTYNTLI AYCREGLLEEAF++ N M+ 
Sbjct: 122 NIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMAD 181

Query: 13  KGFE 2
           KG +
Sbjct: 182 KGLK 185



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
 Frame = -2

Query: 355 SEAFR---ILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIM 185
           SEAFR   ++  +G    +  CN+++ G  +      A E    M+  G   +  + N +
Sbjct: 450 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 509

Query: 184 VNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           +N   +E  +  A +++ +ME+ G+ PDI+TYN ++N +CR+G ++EA  +   M  KG
Sbjct: 510 INGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
 Frame = -2

Query: 352 EAFRI---LKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMV 182
           EA +I   +  +G ++ +   N++L GL K   +  A +++ EMV  G   + YT   ++
Sbjct: 311 EALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 370

Query: 181 NAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDL 32
           +  C++G +  A+     M +R I PDIV YNTLI+ +C+ G +E+A +L
Sbjct: 371 HGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASEL 420



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/98 (34%), Positives = 57/98 (58%)
 Frame = -2

Query: 298 NSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMVNAMCKEGKVKNAVVYLTEMEE 119
           N+L+ G V+ D +D A+    +M   G   ++ T N+++N  C++G+++ A + L +M E
Sbjct: 507 NTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIE 566

Query: 118 RGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKGF 5
           +GI PD  TY  LIN +  +  L EAF   + M  +GF
Sbjct: 567 KGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGF 604



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/120 (33%), Positives = 57/120 (47%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNI 188
           + +A   F  +  R     I   N+L+ G  KV  ++ A E++  M+      N  T  I
Sbjct: 379 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 438

Query: 187 MVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           ++NA C  G V  A      M E+GI P +VT NT+I  YCR G   +A +    M AKG
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/110 (30%), Positives = 56/110 (50%)
 Frame = -2

Query: 337 LKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMVNAMCKEGK 158
           ++  G    +   N+L+G   +   ++ A+EI   M   G + +++T N ++N +CK+G+
Sbjct: 144 MEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGR 203

Query: 157 VKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
              A   L EM   G+ PD  TYNTL+   CR     EA ++   M  +G
Sbjct: 204 YARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG 253



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNS-LLGGLVKVDWIDMAWEIYREMVGSGTEVNVYT 197
           R L +A   FR +K  G +VP N   + L+ G  +   +  A +I  EM+  G  ++V  
Sbjct: 272 RHLDQALVYFRDMKKFG-LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 330

Query: 196 LNIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMS 17
            N ++N +CKE  + +A     EM ERG  PD  T+ TLI+ +C++G + +A  L   M+
Sbjct: 331 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 390

Query: 16  AKGFE 2
            +  +
Sbjct: 391 QRNIK 395



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/121 (27%), Positives = 59/121 (48%)
 Frame = -2

Query: 370 KLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLN 191
           ++ +ASE +  + SR           L+     V  +  A+ ++  M+  G +  + T N
Sbjct: 413 EMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCN 472

Query: 190 IMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAK 11
            ++   C+ G    A  +L  M  +G+ PD ++YNTLIN + RE  +++AF   N M  +
Sbjct: 473 TVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKE 532

Query: 10  G 8
           G
Sbjct: 533 G 533



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/118 (26%), Positives = 59/118 (50%)
 Frame = -2

Query: 361 EASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMV 182
           EA E F  +  +G +  +   +SL+    +   +D A   +R+M   G   +     +++
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLM 300

Query: 181 NAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           +  C+ G +  A+    EM E+G   D++ YNT++N  C+E +L +A  L + M  +G
Sbjct: 301 HGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358


>ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518645|gb|AET00269.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  174 bits (442), Expect = 5e-42
 Identities = 78/124 (62%), Positives = 101/124 (81%)
 Frame = -2

Query: 373 RKLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTL 194
           RKLRE SEAF++L+ RGF V IN CN+LLG +VKV W+D+AW++Y + V SG  VNVYTL
Sbjct: 168 RKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTL 227

Query: 193 NIMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSA 14
           NIMVNA+CK+GK+ N  VYL+EMEE+G++ D+VTYNTL+NAYCR GL+ EAF L + M+ 
Sbjct: 228 NIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAG 287

Query: 13  KGFE 2
           KG +
Sbjct: 288 KGLK 291



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/99 (36%), Positives = 61/99 (61%)
 Frame = -2

Query: 328 RGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMVNAMCKEGKVKN 149
           RG ++ +   N+LL GL +   +D A E+++EMV  G   + YTL  +++  CK+G +  
Sbjct: 428 RGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTK 487

Query: 148 AVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDL 32
           A+     M  R + PD+VTYNTL++ +C+ G +E+A +L
Sbjct: 488 ALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKEL 526



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
 Frame = -2

Query: 355 SEAFRI---LKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIM 185
           SEAFR+   +K +G    +  CN+++ G ++   +  A +    M+  G   +  T N +
Sbjct: 556 SEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTL 615

Query: 184 VNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           +N+  KE     A   +  MEERG+ P++VTYN ++  + R G ++EA  + + M  KG
Sbjct: 616 INSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKG 674



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/120 (30%), Positives = 61/120 (50%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNI 188
           + +A   F  +  R     +   N+L+ G  KV  ++ A E++ +M+      +  + +I
Sbjct: 485 MTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSI 544

Query: 187 MVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           ++N  C  G V  A     EM+E+GI P +VT NT+I  Y R G L +A D  N M ++G
Sbjct: 545 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/123 (30%), Positives = 62/123 (50%)
 Frame = -2

Query: 370 KLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLN 191
           +L  A   F  +K  G +        L+ G  + D +  A ++  EMV  G  ++V T N
Sbjct: 379 ELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYN 438

Query: 190 IMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAK 11
            ++N +C+   + +A     EM ERG+FPD  T  TLI+ YC++G + +A  L   M+ +
Sbjct: 439 TLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLR 498

Query: 10  GFE 2
             +
Sbjct: 499 SLK 501



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/118 (30%), Positives = 58/118 (49%)
 Frame = -2

Query: 361 EASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNIMV 182
           EA   F  +  RG +  +   +S++G   +   +  A   + +M G G   +     I++
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 406

Query: 181 NAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           N  C+   V  A+    EM ERG   D+VTYNTL+N  CR  +L++A +L   M  +G
Sbjct: 407 NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/121 (27%), Positives = 59/121 (48%)
 Frame = -2

Query: 370 KLREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLN 191
           ++ +A E +  + SR         + L+ G   +  +  A+ ++ EM   G +  + T N
Sbjct: 519 EMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCN 578

Query: 190 IMVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAK 11
            ++    + G +  A  +L  M   G+ PD +TYNTLIN++ +E   + AF L N M  +
Sbjct: 579 TIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEER 638

Query: 10  G 8
           G
Sbjct: 639 G 639



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/121 (28%), Positives = 62/121 (51%)
 Frame = -2

Query: 367 LREASEAFRILKSRGFMVPINGCNSLLGGLVKVDWIDMAWEIYREMVGSGTEVNVYTLNI 188
           L +A++    + S G        N+L+   VK +  D A+ +   M   G   N+ T N 
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649

Query: 187 MVNAMCKEGKVKNAVVYLTEMEERGIFPDIVTYNTLINAYCREGLLEEAFDLKNIMSAKG 8
           ++    + G+++ A + L +M ++GI PD  TY +LIN Y  +  ++EAF + + M  +G
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709

Query: 7   F 5
           F
Sbjct: 710 F 710