BLASTX nr result

ID: Coptis23_contig00037669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037669
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328937.1| predicted protein [Populus trichocarpa] gi|1...    79   3e-13
ref|XP_002300114.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|NP_198912.1| uncharacterized protein [Arabidopsis thaliana] ...    71   1e-10
ref|XP_002868622.1| hypothetical protein ARALYDRAFT_916123 [Arab...    71   1e-10
ref|NP_001044809.1| Os01g0849500 [Oryza sativa Japonica Group] g...    70   2e-10

>ref|XP_002328937.1| predicted protein [Populus trichocarpa] gi|118483654|gb|ABK93721.1|
           unknown [Populus trichocarpa]
           gi|222839367|gb|EEE77704.1| predicted protein [Populus
           trichocarpa]
          Length = 68

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = -1

Query: 364 MNDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVH 224
           MNDWAA +IA ALF FL+PGL+FQMPGK RP+DF+NMKTSL +I VH
Sbjct: 1   MNDWAASLIAAALFAFLSPGLVFQMPGKERPLDFMNMKTSLAAIFVH 47


>ref|XP_002300114.1| predicted protein [Populus trichocarpa] gi|222847372|gb|EEE84919.1|
           predicted protein [Populus trichocarpa]
          Length = 68

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = -1

Query: 364 MNDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVH 224
           M DWAAP+IA ALF FL+PGL+FQMPGK RP+DF+NMKTSL ++ VH
Sbjct: 1   MKDWAAPLIAAALFAFLSPGLVFQMPGKERPLDFMNMKTSLAAMFVH 47


>ref|NP_198912.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9759142|dbj|BAB09698.1| unnamed protein product
           [Arabidopsis thaliana] gi|21554020|gb|AAM63101.1|
           unknown [Arabidopsis thaliana]
           gi|88010816|gb|ABD38857.1| At5g40960 [Arabidopsis
           thaliana] gi|332007236|gb|AED94619.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 68

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/47 (65%), Positives = 38/47 (80%)
 Frame = -1

Query: 364 MNDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVH 224
           M+DWAAP+IA ALF FL+PGL+ Q PGK  PV F+NMKT++ SI VH
Sbjct: 1   MHDWAAPLIASALFAFLSPGLILQFPGKESPVGFMNMKTTVASIFVH 47


>ref|XP_002868622.1| hypothetical protein ARALYDRAFT_916123 [Arabidopsis lyrata subsp.
           lyrata] gi|297314458|gb|EFH44881.1| hypothetical protein
           ARALYDRAFT_916123 [Arabidopsis lyrata subsp. lyrata]
          Length = 68

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/47 (65%), Positives = 38/47 (80%)
 Frame = -1

Query: 364 MNDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVH 224
           M+DWAAP+IA ALF FL+PGL+ Q PGK  PV F+NMKT++ SI VH
Sbjct: 1   MHDWAAPLIASALFAFLSPGLILQFPGKESPVGFMNMKTTVASIFVH 47


>ref|NP_001044809.1| Os01g0849500 [Oryza sativa Japonica Group]
           gi|113534340|dbj|BAF06723.1| Os01g0849500 [Oryza sativa
           Japonica Group] gi|125572638|gb|EAZ14153.1| hypothetical
           protein OsJ_04083 [Oryza sativa Japonica Group]
           gi|215766895|dbj|BAG99123.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218189379|gb|EEC71806.1| hypothetical protein
           OsI_04440 [Oryza sativa Indica Group]
          Length = 68

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -1

Query: 364 MNDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHA 221
           M DWA  IIA ALF  L PG + QMPG++RPVDF+NMKTSL SI+VHA
Sbjct: 1   MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHA 48


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