BLASTX nr result

ID: Coptis23_contig00037661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037661
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD...    62   4e-08
emb|CBI17340.3| unnamed protein product [Vitis vinifera]               62   4e-08
emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]    62   4e-08
ref|XP_003612211.1| hypothetical protein MTR_5g022570 [Medicago ...    60   2e-07
gb|AFK37972.1| unknown [Lotus japonicus]                               58   9e-07

>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis
           vinifera]
          Length = 1013

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/52 (65%), Positives = 37/52 (71%)
 Frame = -1

Query: 157 NRPRRSNRVSLQQPIQDQPRAKWTLYLTKILADLMVEQVYKCNGQNNSFGKK 2
           +RP R  R   Q   + QPRAKWT  LTKILADLMV+QV K N QNNSFGKK
Sbjct: 707 SRPTRLRRPYQQH--EQQPRAKWTASLTKILADLMVDQVRKGNRQNNSFGKK 756


>emb|CBI17340.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/52 (65%), Positives = 37/52 (71%)
 Frame = -1

Query: 157 NRPRRSNRVSLQQPIQDQPRAKWTLYLTKILADLMVEQVYKCNGQNNSFGKK 2
           +RP R  R   Q   + QPRAKWT  LTKILADLMV+QV K N QNNSFGKK
Sbjct: 3   SRPTRLRRPYQQH--EQQPRAKWTASLTKILADLMVDQVRKGNRQNNSFGKK 52


>emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]
          Length = 1125

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/52 (65%), Positives = 37/52 (71%)
 Frame = -1

Query: 157 NRPRRSNRVSLQQPIQDQPRAKWTLYLTKILADLMVEQVYKCNGQNNSFGKK 2
           +RP R  R   Q   + QPRAKWT  LTKILADLMV+QV K N QNNSFGKK
Sbjct: 785 SRPTRLRRPYQQH--EQQPRAKWTASLTKILADLMVDQVRKGNRQNNSFGKK 834


>ref|XP_003612211.1| hypothetical protein MTR_5g022570 [Medicago truncatula]
           gi|355513546|gb|AES95169.1| hypothetical protein
           MTR_5g022570 [Medicago truncatula]
          Length = 298

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/51 (64%), Positives = 37/51 (72%)
 Frame = -1

Query: 154 RPRRSNRVSLQQPIQDQPRAKWTLYLTKILADLMVEQVYKCNGQNNSFGKK 2
           R  RS R+  QQ   +Q RAKWT  LTKILADLMV+QV+K N QNNSF KK
Sbjct: 4   RITRSRRLETQQ--LEQSRAKWTASLTKILADLMVDQVHKGNKQNNSFNKK 52


>gb|AFK37972.1| unknown [Lotus japonicus]
          Length = 147

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/48 (64%), Positives = 35/48 (72%)
 Frame = -1

Query: 145 RSNRVSLQQPIQDQPRAKWTLYLTKILADLMVEQVYKCNGQNNSFGKK 2
           RS R+  QQ  Q+Q RAKWT  LTKILA LMV+QV+K N  NNSF KK
Sbjct: 7   RSRRLETQQ--QEQSRAKWTTSLTKILAGLMVDQVHKGNKNNNSFNKK 52


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