BLASTX nr result

ID: Coptis23_contig00037654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037654
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|2...   157   4e-50
ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...   153   8e-49
ref|XP_002519725.1| starch synthase, putative [Ricinus communis]...   153   1e-47
emb|CAA16796.1| starch synthase-like protein [Arabidopsis thalia...   144   5e-46
ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana] gi|122...   144   5e-46

>ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|222845772|gb|EEE83319.1|
           predicted protein [Populus trichocarpa]
          Length = 887

 Score =  157 bits (398), Expect(2) = 4e-50
 Identities = 74/79 (93%), Positives = 78/79 (98%)
 Frame = +1

Query: 94  INSARICFTCHNFEYQGSAPASELASCGLDVSQLNRPDRMQDNSAHDRVNPVKGAVVFSN 273
           +NSARICFTCHNFEYQG+APASELASCGLDV QLNRPDRMQDNSAHDRVNPVKGAVVFSN
Sbjct: 545 LNSARICFTCHNFEYQGTAPASELASCGLDVHQLNRPDRMQDNSAHDRVNPVKGAVVFSN 604

Query: 274 IVTTISPTYAQEVQTAEGG 330
           IVTT+SPTYAQEV+TAEGG
Sbjct: 605 IVTTVSPTYAQEVRTAEGG 623



 Score = 65.5 bits (158), Expect(2) = 4e-50
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +2

Query: 8   KKPDILYCHDWQTAFVAPLYWDIYPPKGL 94
           KKPDI++CHDWQTAFVAPLYWD+Y PKGL
Sbjct: 517 KKPDIIHCHDWQTAFVAPLYWDLYAPKGL 545


>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
           gi|297740652|emb|CBI30834.3| unnamed protein product
           [Vitis vinifera]
          Length = 1011

 Score =  153 bits (387), Expect(2) = 8e-49
 Identities = 70/79 (88%), Positives = 77/79 (97%)
 Frame = +1

Query: 94  INSARICFTCHNFEYQGSAPASELASCGLDVSQLNRPDRMQDNSAHDRVNPVKGAVVFSN 273
           +NSARICFTCHNFEYQG+APASE+ASCGLDV  LNRPDRMQDNSAHDRVNPVKGA+VFSN
Sbjct: 669 LNSARICFTCHNFEYQGTAPASEMASCGLDVHHLNRPDRMQDNSAHDRVNPVKGAIVFSN 728

Query: 274 IVTTISPTYAQEVQTAEGG 330
           IVTT+SPTYAQEV+T+EGG
Sbjct: 729 IVTTVSPTYAQEVRTSEGG 747



 Score = 65.5 bits (158), Expect(2) = 8e-49
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +2

Query: 8   KKPDILYCHDWQTAFVAPLYWDIYPPKGL 94
           KKPDI++CHDWQTAFVAPLYWD+Y PKGL
Sbjct: 641 KKPDIIHCHDWQTAFVAPLYWDLYAPKGL 669


>ref|XP_002519725.1| starch synthase, putative [Ricinus communis]
           gi|223541142|gb|EEF42698.1| starch synthase, putative
           [Ricinus communis]
          Length = 998

 Score =  153 bits (386), Expect(2) = 1e-47
 Identities = 71/79 (89%), Positives = 76/79 (96%)
 Frame = +1

Query: 94  INSARICFTCHNFEYQGSAPASELASCGLDVSQLNRPDRMQDNSAHDRVNPVKGAVVFSN 273
           +NSARICFTCHNFEYQG+APASELASCGLDV  LNRPDRMQDN AHDR+NPVKGAVVFSN
Sbjct: 655 LNSARICFTCHNFEYQGTAPASELASCGLDVHHLNRPDRMQDNLAHDRINPVKGAVVFSN 714

Query: 274 IVTTISPTYAQEVQTAEGG 330
           IVTT+SPTYAQEV+TAEGG
Sbjct: 715 IVTTVSPTYAQEVRTAEGG 733



 Score = 61.6 bits (148), Expect(2) = 1e-47
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +2

Query: 8   KKPDILYCHDWQTAFVAPLYWDIYPPKGL 94
           KKPDI++ HDWQTAFVAPLYWD+Y PKGL
Sbjct: 627 KKPDIIHSHDWQTAFVAPLYWDLYAPKGL 655


>emb|CAA16796.1| starch synthase-like protein [Arabidopsis thaliana]
           gi|7268617|emb|CAB78826.1| starch synthase-like protein
           [Arabidopsis thaliana]
          Length = 1071

 Score =  144 bits (363), Expect(2) = 5e-46
 Identities = 66/79 (83%), Positives = 76/79 (96%)
 Frame = +1

Query: 94  INSARICFTCHNFEYQGSAPASELASCGLDVSQLNRPDRMQDNSAHDRVNPVKGAVVFSN 273
           ++SARICFTCHNFEYQG+A ASEL SCGLDV+QLNRPDRMQD+S+ DRVNPVKGA++FSN
Sbjct: 700 LDSARICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDHSSGDRVNPVKGAIIFSN 759

Query: 274 IVTTISPTYAQEVQTAEGG 330
           IVTT+SPTYAQEV+TAEGG
Sbjct: 760 IVTTVSPTYAQEVRTAEGG 778



 Score = 65.5 bits (158), Expect(2) = 5e-46
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +2

Query: 8   KKPDILYCHDWQTAFVAPLYWDIYPPKGL 94
           KKPDI++CHDWQTAFVAPLYWD+Y PKGL
Sbjct: 672 KKPDIIHCHDWQTAFVAPLYWDLYAPKGL 700


>ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana]
           gi|122230204|sp|Q0WVX5.1|SSY4_ARATH RecName:
           Full=Probable starch synthase 4,
           chloroplastic/amyloplastic; Short=AtSS4; AltName:
           Full=Soluble starch synthase IV; Flags: Precursor
           gi|110741548|dbj|BAE98723.1| starch synthase-like
           protein [Arabidopsis thaliana]
           gi|332658615|gb|AEE84015.1| starch synthase 4
           [Arabidopsis thaliana]
          Length = 1040

 Score =  144 bits (363), Expect(2) = 5e-46
 Identities = 66/79 (83%), Positives = 76/79 (96%)
 Frame = +1

Query: 94  INSARICFTCHNFEYQGSAPASELASCGLDVSQLNRPDRMQDNSAHDRVNPVKGAVVFSN 273
           ++SARICFTCHNFEYQG+A ASEL SCGLDV+QLNRPDRMQD+S+ DRVNPVKGA++FSN
Sbjct: 697 LDSARICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDHSSGDRVNPVKGAIIFSN 756

Query: 274 IVTTISPTYAQEVQTAEGG 330
           IVTT+SPTYAQEV+TAEGG
Sbjct: 757 IVTTVSPTYAQEVRTAEGG 775



 Score = 65.5 bits (158), Expect(2) = 5e-46
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +2

Query: 8   KKPDILYCHDWQTAFVAPLYWDIYPPKGL 94
           KKPDI++CHDWQTAFVAPLYWD+Y PKGL
Sbjct: 669 KKPDIIHCHDWQTAFVAPLYWDLYAPKGL 697


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