BLASTX nr result

ID: Coptis23_contig00037642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037642
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29839.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l...    57   2e-06

>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -2

Query: 232 GTFLAYTSAVQDCIALTRQMVKALREIVNEVIADMELD 119
           G  LAY SAVQDCIALTRQ VK L+ I+NE I+DME+D
Sbjct: 274 GPVLAYASAVQDCIALTRQRVKELKSILNEAISDMEVD 311


>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
          Length = 303

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -2

Query: 232 GTFLAYTSAVQDCIALTRQMVKALREIVNEVIADMELD 119
           G  LAY SAVQDCIALTRQ VK L+ I+NE I+DME+D
Sbjct: 266 GPVLAYASAVQDCIALTRQRVKELKSILNEAISDMEVD 303


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