BLASTX nr result

ID: Coptis23_contig00037639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037639
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298634.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
gb|AFK47378.1| unknown [Lotus japonicus]                              113   2e-23
ref|XP_002304676.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002328877.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_004138621.1| PREDICTED: uncharacterized protein LOC101211...   110   1e-22

>ref|XP_002298634.1| predicted protein [Populus trichocarpa]
           gi|224055751|ref|XP_002298635.1| predicted protein
           [Populus trichocarpa] gi|222845892|gb|EEE83439.1|
           predicted protein [Populus trichocarpa]
           gi|222845893|gb|EEE83440.1| predicted protein [Populus
           trichocarpa]
          Length = 70

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/70 (81%), Positives = 61/70 (87%)
 Frame = +2

Query: 65  MSDWGPVFVAVVLFILLTPGLLIQVPGPNRLVEFSNFQTSGASIMVHSVLYLILMAIFLL 244
           MSDWGPVFVAVVLFILLTPGLLIQ+PG  RLVEF NFQTSG SI+VHS+LY  L+ IFLL
Sbjct: 1   MSDWGPVFVAVVLFILLTPGLLIQIPGRQRLVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 245 AVKVHVYVDS 274
           AV VHVYV S
Sbjct: 61  AVGVHVYVGS 70


>gb|AFK47378.1| unknown [Lotus japonicus]
          Length = 69

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/68 (75%), Positives = 63/68 (92%)
 Frame = +2

Query: 65  MSDWGPVFVAVVLFILLTPGLLIQVPGPNRLVEFSNFQTSGASIMVHSVLYLILMAIFLL 244
           M+DWGPVFV+VVLFILLTPGLLIQ+PG +R+VEF NFQTSGASI+VHS+LY +L+ IFLL
Sbjct: 1   MADWGPVFVSVVLFILLTPGLLIQIPGKSRMVEFGNFQTSGASILVHSILYFVLVCIFLL 60

Query: 245 AVKVHVYV 268
           A+ VH+Y+
Sbjct: 61  AIGVHMYM 68


>ref|XP_002304676.1| predicted protein [Populus trichocarpa] gi|222842108|gb|EEE79655.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/68 (76%), Positives = 61/68 (89%)
 Frame = +2

Query: 65  MSDWGPVFVAVVLFILLTPGLLIQVPGPNRLVEFSNFQTSGASIMVHSVLYLILMAIFLL 244
           MSDWGPVF+AVVLFILLTPGLL QVPG +R +EF NFQTSGASIMVH++LY  L+ +FLL
Sbjct: 1   MSDWGPVFMAVVLFILLTPGLLFQVPGRHRSIEFGNFQTSGASIMVHTLLYFALICVFLL 60

Query: 245 AVKVHVYV 268
           AVKVH+Y+
Sbjct: 61  AVKVHLYL 68


>ref|XP_002328877.1| predicted protein [Populus trichocarpa] gi|222839307|gb|EEE77644.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = +2

Query: 65  MSDWGPVFVAVVLFILLTPGLLIQVPGPNRLVEFSNFQTSGASIMVHSVLYLILMAIFLL 244
           MSDWGPVFVAVVLFILLTPGLLIQ+PG +R +EF NF+TSG SI+VHS+LY  L+ IFLL
Sbjct: 1   MSDWGPVFVAVVLFILLTPGLLIQMPGHHRFIEFGNFKTSGVSILVHSILYFALICIFLL 60

Query: 245 AVKVHVYVDS 274
           AV VH+YV S
Sbjct: 61  AVGVHMYVGS 70


>ref|XP_004138621.1| PREDICTED: uncharacterized protein LOC101211888 [Cucumis sativus]
           gi|449531380|ref|XP_004172664.1| PREDICTED:
           uncharacterized LOC101211888 [Cucumis sativus]
          Length = 142

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/67 (74%), Positives = 60/67 (89%)
 Frame = +2

Query: 65  MSDWGPVFVAVVLFILLTPGLLIQVPGPNRLVEFSNFQTSGASIMVHSVLYLILMAIFLL 244
           M+DWGPVFVAV+LF+LLTPGLL+Q+PG +R VEF NFQTSG SI+VHS+LY  L+ IFLL
Sbjct: 1   MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 245 AVKVHVY 265
           AV+VHVY
Sbjct: 61  AVRVHVY 67



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 33/67 (49%), Positives = 52/67 (77%)
 Frame = +2

Query: 65  MSDWGPVFVAVVLFILLTPGLLIQVPGPNRLVEFSNFQTSGASIMVHSVLYLILMAIFLL 244
           MSDW PV + VVLF+LL+PGLL Q PG NR  EF + +T+G ++ +H++++ +L A+F+L
Sbjct: 74  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 133

Query: 245 AVKVHVY 265
           A+ +H+Y
Sbjct: 134 ALHIHIY 140


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