BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037611
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 67   1e-09
ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697...    57   2e-06
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               55   8e-06

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/82 (40%), Positives = 50/82 (60%)
 Frame = +2

Query: 5   TVIVPLFITYDLLDIIEGTGPCPSKFISDENGNQTNKINPHFVN*VKRDQMLMIWINSTL 184
           ++ +P+   + L+ ++ G   CP  F+ D +G  T   N  F    +RDQ+LMIWINSTL
Sbjct: 288 SLFIPVLKRFKLIGLVNGEDLCPPPFVRDPSG--TCVPNASFETWCERDQILMIWINSTL 345

Query: 185 SEEILPYVVGVIASRQLWLQLE 250
           S+++LP  +G+  SR LW  LE
Sbjct: 346 SKDLLPLTIGMEDSRSLWQSLE 367


>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/80 (35%), Positives = 49/80 (61%)
 Frame = +2

Query: 11  IVPLFITYDLLDIIEGTGPCPSKFISDENGNQTNKINPHFVN*VKRDQMLMIWINSTLSE 190
           IVP+  + +L+  + GT PCP +F S+ +G  T +++P +    ++DQM++ WIN++LS 
Sbjct: 35  IVPILKSKNLMGFVTGTNPCPPEFKSNTDGTITTEVDPRYATWHQQDQMILSWINNSLSP 94

Query: 191 EILPYVVGVIASRQLWLQLE 250
            +L  V    +S+  W  LE
Sbjct: 95  TVLSTVARFTSSQATWSSLE 114


>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
           putative protein [Arabidopsis thaliana]
          Length = 1415

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +2

Query: 38  LLDIIEGTGPCPSKFISDENGNQ-TNKINPHFVN*VKRDQMLMIWINSTLSEEILPYVVG 214
           LL  + G  PCP+   S  NG+Q T   NP F+  V+ DQ +M W+  +LSE+ L  V G
Sbjct: 42  LLGFVTGANPCPNATRSIRNGDQVTEATNPDFLTWVQNDQKIMGWLLGSLSEDALRSVYG 101

Query: 215 VIASRQLWLQL 247
           +  SR++W  L
Sbjct: 102 LHTSREVWFSL 112


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/79 (31%), Positives = 43/79 (54%)
 Frame = +2

Query: 11  IVPLFITYDLLDIIEGTGPCPSKFISDENGNQTNKINPHFVN*VKRDQMLMIWINSTLSE 190
           I P+  +  L   ++GT  CP  F+ D+ G  T+++NP F   + +DQM++ WIN +L+ 
Sbjct: 33  ITPILKSRKLWGFVDGTNLCPPCFLKDKAGQLTDQVNPDFEPWILQDQMVLSWINGSLTP 92

Query: 191 EILPYVVGVIASRQLWLQL 247
           ++L  V    +    W  L
Sbjct: 93  KVLSTVARSTSLHATWTAL 111