BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037599
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135980.1| PREDICTED: probable pre-mRNA-splicing factor...   250   9e-65
ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor...   248   6e-64
ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinu...   245   3e-63
ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor...   244   5e-63
ref|XP_002301528.1| predicted protein [Populus trichocarpa] gi|2...   243   2e-62

>ref|XP_004135980.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Cucumis sativus]
           gi|449515243|ref|XP_004164659.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           [Cucumis sativus]
          Length = 732

 Score =  250 bits (639), Expect = 9e-65
 Identities = 134/184 (72%), Positives = 146/184 (79%), Gaps = 1/184 (0%)
 Frame = +2

Query: 2   ETTVSSAAKLAKLNGGLV-FXXXXXXXXXSLINKCMGRAYSPNYYGILEKRKSLPVWQQK 178
           ET+VS  AKL K+NGG+            SLIN+  GR +S  YY ILEKRK+LPVW QK
Sbjct: 17  ETSVS--AKLNKVNGGVAPLNNGGGNAGNSLINRWTGRQFSQRYYEILEKRKTLPVWHQK 74

Query: 179 EEFFQVLNVNQTLILVGETGSGKTTQIPQFVLDAVNLESQDKRKKMMVACTQPXXXXXXX 358
           EEFFQVL  +QTLILVGETGSGKTTQIPQFVL+AV+L+S DKRKKMMVACTQP       
Sbjct: 75  EEFFQVLKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKMMVACTQPRRVAAMS 134

Query: 359 XXXXXXEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVIVLD 538
                 EEMDVTIGEEVGYSIRFEDCSSA+TVLKYLTDGMLLREAMTDPLLERYKVI+LD
Sbjct: 135 VSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILD 194

Query: 539 EAHE 550
           EAHE
Sbjct: 195 EAHE 198


>ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 720

 Score =  248 bits (632), Expect = 6e-64
 Identities = 131/178 (73%), Positives = 138/178 (77%)
 Frame = +2

Query: 17  SAAKLAKLNGGLVFXXXXXXXXXSLINKCMGRAYSPNYYGILEKRKSLPVWQQKEEFFQV 196
           SAAK+AK NGG            +LIN    R YS  Y+ ILEKRK+LPVW QKEEF QV
Sbjct: 18  SAAKMAKTNGGAA---------NNLINHWTSRPYSQRYFEILEKRKTLPVWHQKEEFLQV 68

Query: 197 LNVNQTLILVGETGSGKTTQIPQFVLDAVNLESQDKRKKMMVACTQPXXXXXXXXXXXXX 376
           L  NQTLILVGETGSGKTTQIPQFVLDAV LE+ DKRKKMM+ACTQP             
Sbjct: 69  LKDNQTLILVGETGSGKTTQIPQFVLDAVELETPDKRKKMMIACTQPRRVAAMSVSRRVA 128

Query: 377 EEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHE 550
           EEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVI+LDEAHE
Sbjct: 129 EEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHE 186


>ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223545725|gb|EEF47229.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 731

 Score =  245 bits (626), Expect = 3e-63
 Identities = 130/183 (71%), Positives = 141/183 (77%)
 Frame = +2

Query: 2   ETTVSSAAKLAKLNGGLVFXXXXXXXXXSLINKCMGRAYSPNYYGILEKRKSLPVWQQKE 181
           ET+VS  AK+AK NGG            SLIN   G+ YS  YY ILEKRK+LPVW QKE
Sbjct: 17  ETSVS--AKIAKSNGGGGAAMNNNGSSNSLINSWNGKPYSQRYYEILEKRKTLPVWHQKE 74

Query: 182 EFFQVLNVNQTLILVGETGSGKTTQIPQFVLDAVNLESQDKRKKMMVACTQPXXXXXXXX 361
           EF  VL  NQ LILVGETGSGKTTQIPQFVL+AV++E+ DKR+KMM+ACTQP        
Sbjct: 75  EFLSVLKKNQVLILVGETGSGKTTQIPQFVLEAVDIETPDKRRKMMIACTQPRRVAAMSV 134

Query: 362 XXXXXEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVIVLDE 541
                EEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVI+LDE
Sbjct: 135 SRRVAEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVIILDE 194

Query: 542 AHE 550
           AHE
Sbjct: 195 AHE 197


>ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 1 [Glycine max]
          Length = 721

 Score =  244 bits (624), Expect = 5e-63
 Identities = 130/178 (73%), Positives = 137/178 (76%)
 Frame = +2

Query: 17  SAAKLAKLNGGLVFXXXXXXXXXSLINKCMGRAYSPNYYGILEKRKSLPVWQQKEEFFQV 196
           SAAK+AK NGG            +L N    R YS  Y+ ILEKRK+LPVW QKEEF QV
Sbjct: 18  SAAKMAKSNGGAA--------ANNLTNHWTARPYSQRYFEILEKRKTLPVWHQKEEFLQV 69

Query: 197 LNVNQTLILVGETGSGKTTQIPQFVLDAVNLESQDKRKKMMVACTQPXXXXXXXXXXXXX 376
           L  NQTLILVGETGSGKTTQIPQFVLDAV LE+ DKR+KMMVACTQP             
Sbjct: 70  LKDNQTLILVGETGSGKTTQIPQFVLDAVELETPDKRRKMMVACTQPRRVAAMSVSRRVA 129

Query: 377 EEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHE 550
           EEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVI+LDEAHE
Sbjct: 130 EEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHE 187


>ref|XP_002301528.1| predicted protein [Populus trichocarpa] gi|222843254|gb|EEE80801.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  243 bits (619), Expect = 2e-62
 Identities = 126/179 (70%), Positives = 139/179 (77%)
 Frame = +2

Query: 14  SSAAKLAKLNGGLVFXXXXXXXXXSLINKCMGRAYSPNYYGILEKRKSLPVWQQKEEFFQ 193
           S +AK+ K NG +           SLIN+  G+ YS  YY ILEKRK+LPVW QKE+F Q
Sbjct: 19  SLSAKIVKSNGAM---GNNNNGGSSLINRWNGKPYSQRYYDILEKRKNLPVWHQKEDFLQ 75

Query: 194 VLNVNQTLILVGETGSGKTTQIPQFVLDAVNLESQDKRKKMMVACTQPXXXXXXXXXXXX 373
           VL  NQ +ILVGETGSGKTTQIPQFVL+AV+LES DKR+KMM+ACTQP            
Sbjct: 76  VLKKNQAIILVGETGSGKTTQIPQFVLEAVDLESPDKRRKMMIACTQPRRVAAMSVSRRV 135

Query: 374 XEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHE 550
            EEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVI+LDEAHE
Sbjct: 136 AEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHE 194