BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037591
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...   131   7e-29
ref|XP_002512113.1| pentatricopeptide repeat-containing protein,...   123   2e-26
ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   121   5e-26
ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26

>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 536

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/92 (71%), Positives = 77/92 (83%)
 Frame = +1

Query: 7   WTVMISAYAKKGVVETSRLYFDNAPVKDRGICGSMNSGYVQNNCFKEGLEMFRLI*SEGF 186
           WTVMIS YAK G VET+R+ FD AP+KDRGI GS+ SGYVQNNCFKEGL+MFRL+ S G 
Sbjct: 174 WTVMISGYAKVGDVETARMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGL 233

Query: 187 EPDEAVFDSVLSACAH*GAMDIGKWIHRYLDR 282
           EPDEA+  S+L ACAH GAM+IG W+HRYLD+
Sbjct: 234 EPDEAILVSILCACAHLGAMEIGVWVHRYLDQ 265


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score =  131 bits (329), Expect = 7e-29
 Identities = 62/93 (66%), Positives = 76/93 (81%)
 Frame = +1

Query: 7   WTVMISAYAKKGVVETSRLYFDNAPVKDRGICGSMNSGYVQNNCFKEGLEMFRLI*SEGF 186
           W+VMIS YAK G V+++RL+FD AP KDRGI G+M SGYVQN+CFKEGL +FRL+     
Sbjct: 174 WSVMISGYAKVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHV 233

Query: 187 EPDEAVFDSVLSACAH*GAMDIGKWIHRYLDRK 285
            PDE++F S+LSACAH GA+DIG WIHRYL+RK
Sbjct: 234 VPDESIFVSILSACAHLGALDIGIWIHRYLNRK 266


>ref|XP_002512113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549293|gb|EEF50782.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 336

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/92 (63%), Positives = 70/92 (76%)
 Frame = +1

Query: 7   WTVMISAYAKKGVVETSRLYFDNAPVKDRGICGSMNSGYVQNNCFKEGLEMFRLI*SEGF 186
           WT+MIS +AK G +E++RL+FD AP KDRGICG+M SGYVQNNCFKE L MF +I     
Sbjct: 126 WTLMISGFAKVGDIESARLFFDGAPRKDRGICGAMISGYVQNNCFKECLYMFSMIQLTDN 185

Query: 187 EPDEAVFDSVLSACAH*GAMDIGKWIHRYLDR 282
            PDE +F S+L ACA  GA+D G WIHRY+DR
Sbjct: 186 VPDEGIFLSILCACAQLGALDTGIWIHRYMDR 217


>ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20540-like [Cucumis sativus]
          Length = 532

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/92 (65%), Positives = 68/92 (73%)
 Frame = +1

Query: 7   WTVMISAYAKKGVVETSRLYFDNAPVKDRGICGSMNSGYVQNNCFKEGLEMFRLI*SEGF 186
           WTVMI  YA  G V+T+R  FD A VKD GI G+M SGYVQNNCFKEGL MFRL+     
Sbjct: 174 WTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEV 233

Query: 187 EPDEAVFDSVLSACAH*GAMDIGKWIHRYLDR 282
           EPDEA+  ++LSACAH GA+D G WIHRYL R
Sbjct: 234 EPDEAIIVTILSACAHMGALDTGIWIHRYLGR 265


>ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cucumis sativus]
          Length = 532

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/92 (65%), Positives = 68/92 (73%)
 Frame = +1

Query: 7   WTVMISAYAKKGVVETSRLYFDNAPVKDRGICGSMNSGYVQNNCFKEGLEMFRLI*SEGF 186
           WTVMI  YA  G V+T+R  FD A VKD GI G+M SGYVQNNCFKEGL MFRL+     
Sbjct: 174 WTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEV 233

Query: 187 EPDEAVFDSVLSACAH*GAMDIGKWIHRYLDR 282
           EPDEA+  ++LSACAH GA+D G WIHRYL R
Sbjct: 234 EPDEAIIVTILSACAHMGALDTGIWIHRYLGR 265