BLASTX nr result

ID: Coptis23_contig00037570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037570
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA19110.1| PEThy;ZPT2-5 [Petunia x hybrida]                      177   2e-42
ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [V...   177   3e-42
gb|AEY76110.1| Cys2/His2-type zinc finger protein [Chrysanthemum...   174   2e-41
ref|XP_002316305.1| predicted protein [Populus trichocarpa] gi|2...   168   1e-39
ref|XP_002528469.1| nucleic acid binding protein, putative [Rici...   166   7e-39

>dbj|BAA19110.1| PEThy;ZPT2-5 [Petunia x hybrida]
          Length = 176

 Score =  177 bits (450), Expect = 2e-42
 Identities = 98/181 (54%), Positives = 122/181 (67%), Gaps = 9/181 (4%)
 Frame = -1

Query: 615 MTMKRSRVDPK--DLANMANCLMLLSQG---EIDSKI--SPPSRVFVCKTCNRKFSSFQA 457
           ++ KR R +     +  MAN LMLLS+      D K+  S  SRVF CKTCNR+FSSFQA
Sbjct: 4   LSTKREREEDNFYSITTMANYLMLLSRQANEHFDKKMNNSSTSRVFECKTCNRQFSSFQA 63

Query: 456 LGGHRASHKKPKQMAGDLSPHTRMISHSTSK--AHECSVCGLEFAIGQALGGHMRRHRAI 283
           LGGHRASHKKP+ M G+L  H   + H   K   HECS+CGLEFAIGQALGGHMRRHRA+
Sbjct: 64  LGGHRASHKKPRLM-GEL--HNLQLFHELPKRKTHECSICGLEFAIGQALGGHMRRHRAV 120

Query: 282 MSSKCSSVPPPQHVPVFKRSNSKRVLSLDLNLAPLENDFEFKIENRLVFENITPPVIHCF 103
           ++ K    P  QH PV K++N +R+LSLDLNL PLEND EF +      ++ T P++ CF
Sbjct: 121 INDKNLQAPDDQHAPVVKKANGRRILSLDLNLTPLENDLEFDLR-----KSNTAPMVDCF 175

Query: 102 I 100
           +
Sbjct: 176 L 176


>ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [Vitis vinifera]
          Length = 176

 Score =  177 bits (448), Expect = 3e-42
 Identities = 99/166 (59%), Positives = 114/166 (68%), Gaps = 12/166 (7%)
 Frame = -1

Query: 615 MTMKRSRVDPKDLANMANCLMLLSQG-EIDSKISPPSRVFVCKTCNRKFSSFQALGGHRA 439
           MTMKR R    +  ++ANCLMLLS+G + DS    PSRVF CKTCNR+F SFQALGGHRA
Sbjct: 1   MTMKRMRDGEHESVSIANCLMLLSRGTDYDSIARVPSRVFECKTCNRQFPSFQALGGHRA 60

Query: 438 SHKKPKQMA--GDLSPHTRMISHSTSKAHECSVCGLEFAIGQALGGHMRRHRAIMS---- 277
           SHKKP+ MA  GD  P     S    K HECS+CGLEFAIGQALGGHMRRHRA  S    
Sbjct: 61  SHKKPRLMALNGD-DPAQLQSSPLKPKTHECSICGLEFAIGQALGGHMRRHRAAASGATQ 119

Query: 276 ----SKCSSVPPPQHVPVFKRSNSKRVLSLDLNLAPLEN-DFEFKI 154
               +  SS PPP   P+ K+ NS+RVL LDLNL PLEN D +F++
Sbjct: 120 ALSETTSSSSPPPPQAPLLKKPNSRRVLCLDLNLTPLENIDLQFQL 165


>gb|AEY76110.1| Cys2/His2-type zinc finger protein [Chrysanthemum x morifolium]
          Length = 178

 Score =  174 bits (440), Expect = 2e-41
 Identities = 99/181 (54%), Positives = 127/181 (70%), Gaps = 11/181 (6%)
 Frame = -1

Query: 609 MKRSRVDPKD--LANMANCLMLLSQGE--IDS-KISPPSRVFVCKTCNRKFSSFQALGGH 445
           MKRSR D  D  + +MAN LMLLS+G   +DS +    SRVF CKTCNR+F SFQALGGH
Sbjct: 6   MKRSRGDEFDTTINSMANYLMLLSRGNTNMDSYQDDSVSRVFECKTCNRQFPSFQALGGH 65

Query: 444 RASHKKPKQMAGDLSPHTRMISHSTS-----KAHECSVCGLEFAIGQALGGHMRRHRAIM 280
           RASHKKP+ + GD++ H     H T+     K H+CS+CG+EFAIGQALGGHMRRHRA  
Sbjct: 66  RASHKKPRLVDGDMTSH----HHDTALLIKPKTHKCSICGVEFAIGQALGGHMRRHRAAT 121

Query: 279 SSK-CSSVPPPQHVPVFKRSNSKRVLSLDLNLAPLENDFEFKIENRLVFENITPPVIHCF 103
           +++  +S+P     PV K+ NS+RV SLDLNL PLENDFEF++++    E +TP  +  F
Sbjct: 122 TTENHASLPLDLSTPVVKKVNSRRVFSLDLNLTPLENDFEFRVDD----EKVTPITVDFF 177

Query: 102 I 100
           +
Sbjct: 178 L 178


>ref|XP_002316305.1| predicted protein [Populus trichocarpa] gi|222865345|gb|EEF02476.1|
           predicted protein [Populus trichocarpa]
           gi|355477194|gb|AES12473.1| C2H2-type zinc finger
           protein 1 [Populus trichocarpa]
          Length = 179

 Score =  168 bits (425), Expect = 1e-39
 Identities = 98/177 (55%), Positives = 116/177 (65%), Gaps = 17/177 (9%)
 Frame = -1

Query: 582 DLANMANCLMLLSQGE-------IDSKIS--PPSRVFVCKTCNRKFSSFQALGGHRASHK 430
           D   MANCLM LS+G         D  +S   P+RVF CKTCNR+F SFQALGGHRASHK
Sbjct: 11  DSITMANCLMFLSKGRESYSFPSFDHAMSNISPARVFECKTCNRQFPSFQALGGHRASHK 70

Query: 429 KPKQMAGDLSPHTRMISHSTSKAHECSVCGLEFAIGQALGGHMRRHRAIMSSKCSSVP-- 256
           KP+ M G+ S  T+  S +  K HECS+CGLEFAIGQALGGHMRRHRA ++ +    P  
Sbjct: 71  KPRLMGGEGSFETQ--SPAKPKTHECSICGLEFAIGQALGGHMRRHRAALNDRNQVDPLN 128

Query: 255 PP-----QHVPVFKRSNSKRVLSLDLNLAPLENDFE-FKIENRLVFENITPPVIHCF 103
           PP     + VPV KRSNS+RVL LDLNL P END E FK+         T P+++CF
Sbjct: 129 PPSTDDQKAVPVVKRSNSRRVLCLDLNLTPYENDMELFKL-------GTTAPMVNCF 178


>ref|XP_002528469.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532145|gb|EEF33952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 190

 Score =  166 bits (419), Expect = 7e-39
 Identities = 103/197 (52%), Positives = 119/197 (60%), Gaps = 27/197 (13%)
 Frame = -1

Query: 609 MKRS-RVDPKDLANMANCLMLLSQG-EIDS----------KISPPSRVFVCKTCNRKFSS 466
           MKRS R    D  +MANCLMLLSQG EI S           I+  +RVF CKTCNR+F S
Sbjct: 1   MKRSFREAEIDSLSMANCLMLLSQGREIVSFPSFEAMKGTNINSSNRVFECKTCNRQFPS 60

Query: 465 FQALGGHRASHKKPKQMAGDLSPHTRMISHSTSKAHECSVCGLEFAIGQALGGHMRRHRA 286
           FQALGGHRASHKKP+   GD+       S +  K HECS+CGLEFAIGQALGGHMRRHRA
Sbjct: 61  FQALGGHRASHKKPRLTNGDVGSLETQSSPAKPKTHECSICGLEFAIGQALGGHMRRHRA 120

Query: 285 IMSSKCS-SVPPPQH-------------VPVFKRSNSKRVLSLDLNLAPLENDFE-FKIE 151
           I +   S S P P                PV K+SNS+RVL LDLNL P END E F++ 
Sbjct: 121 INNDSSSLSTPSPTSSAELMAVKPAGVAPPVMKKSNSRRVLCLDLNLTPYENDVELFRLG 180

Query: 150 NRLVFENITPPVIHCFI 100
                   T P++ CF+
Sbjct: 181 K-------TAPMVDCFL 190


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