BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037566
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymera...   114   6e-24
ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250...   105   5e-21
ref|XP_002308874.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
gb|ACU24154.1| unknown [Glycine max]                                  100   2e-19

>ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 452

 Score =  114 bits (286), Expect = 6e-24
 Identities = 75/171 (43%), Positives = 95/171 (55%), Gaps = 7/171 (4%)
 Frame = -3

Query: 497 CNGVELGV----HKKDEDVGFKFRSVGK-CDVVEG--KESKVGSSVFENENINLNYTSKY 339
           C+ VEL V       D + GFK   V   C+   G  KESKV SS  +   +N N  S +
Sbjct: 63  CDRVELAVAGDIDGDDGETGFKSDFVRDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNF 122

Query: 338 SYHXXXXXXXXXXXXXXXXXXVLRIKEHLSKTEEESEDMILESLRRLKLMTLSVETLQAT 159
           S+                   VLRIKE L+  E+ES+ ++ ESLRRL+LM LSV+TLQAT
Sbjct: 123 SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQAT 182

Query: 158 KIGMEVACLRKHKSKRISSFSRTLVKEWKDLVDKWCSVVPDVIGGEGTPES 6
           +IG  V CLRKH SKRI   +R L+ EWK++VD W      V G E TP+S
Sbjct: 183 EIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQATAAVQGAEVTPDS 233


>ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|222867860|gb|EEF04991.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 6/159 (3%)
 Frame = -3

Query: 461 EDVGFKFRSVGKCDVVEGKESKVGSSVFENE------NINLNYTSKYSYHXXXXXXXXXX 300
           +D GF++   G       KESKV SS  +N+      N+N    S +S+           
Sbjct: 105 DDGGFEYEGGGS------KESKVNSSNRDNDFDNGEVNVNDQLVSNFSFGEAEALTDEIE 158

Query: 299 XXXXXXXXVLRIKEHLSKTEEESEDMILESLRRLKLMTLSVETLQATKIGMEVACLRKHK 120
                   VLRIK+ L  +++ES+ ++LESLR+L+LM L+V+TL+AT+IG  V  LRKH 
Sbjct: 159 EVSQTVDEVLRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHG 218

Query: 119 SKRISSFSRTLVKEWKDLVDKWCSVVPDVIGGEGTPESM 3
           SK+I   +RTL+++WK LVD+W S    + G EGTP+S+
Sbjct: 219 SKQIRHLARTLIEDWKVLVDEWYSAANVIRGNEGTPDSV 257


>ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
          Length = 521

 Score =  105 bits (261), Expect = 5e-21
 Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
 Frame = -3

Query: 497 CNGVELGVHKKDEDVGFKFRSVGKCDV-VEGKESKVGSSVFENENINLNYTSKYSYHXXX 321
           C+ VEL V + D   G   +     DV    KESK  S   ++  +N+N  S YSY    
Sbjct: 63  CDRVELAVPEND---GGGCKIEFDMDVNSSSKESKANSIREDHGEMNMNQVSNYSYGEAE 119

Query: 320 XXXXXXXXXXXXXXXVLRIKEHLSKTEEESEDMILESLRRLKLMTLSVETLQATKIGMEV 141
                          VLRI+E L  +++ES+ ++ +SLRRL+LM LSV+ L+AT+IG  V
Sbjct: 120 ALTDEIEEETQIAGEVLRIREILEHSKDESDSVLFDSLRRLQLMVLSVDNLKATEIGKAV 179

Query: 140 ACLRKHKSKRISSFSRTLVKEWKDLVDKWCSVVPDVIGGEGTPESM 3
             LRKH SK+I   +RTL+ EWKD+VD+W +    +   EGTP+S+
Sbjct: 180 NGLRKHGSKQIRQLARTLIDEWKDMVDEWVNATAAI--AEGTPDSV 223


>ref|XP_002308874.1| predicted protein [Populus trichocarpa] gi|222854850|gb|EEE92397.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  104 bits (260), Expect = 6e-21
 Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
 Frame = -3

Query: 461 EDVGFKFRSVGKCDVVEGKESKVGSSVFENE------NINLNYTSKYSYHXXXXXXXXXX 300
           +D GF++   G       K SKV SS  +N+      N+N      +SY           
Sbjct: 111 DDGGFEYEGGGS------KGSKVNSSNRDNDIDNGEVNVNDQLVYNFSYGDAEALTDEIE 164

Query: 299 XXXXXXXXVLRIKEHLSKTEEESEDMILESLRRLKLMTLSVETLQATKIGMEVACLRKHK 120
                   VLRIK+ L  +++ES+ ++LESLR+L+LM L+V+TL+AT+IG  V  LRKH 
Sbjct: 165 EVSQTVDEVLRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNVLRKHG 224

Query: 119 SKRISSFSRTLVKEWKDLVDKWCSVVPDVIGGEGTPESM 3
           SK+I   +RTL+++WK LVD+W S    + G EGTP+S+
Sbjct: 225 SKQIRYLARTLIEDWKVLVDEWYSTANAIRGDEGTPDSV 263


>gb|ACU24154.1| unknown [Glycine max]
          Length = 336

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 66/174 (37%), Positives = 88/174 (50%), Gaps = 9/174 (5%)
 Frame = -3

Query: 497 CNGVELGVHKKDEDVG------FKFRSVG---KCDVVEGKESKVGSSVFENENINLNYTS 345
           C  VEL V   D+D G        F   G   K +    KESKV S+      +N N  S
Sbjct: 63  CERVELAVPVDDDDDGGGEGCKSGFDGDGDEFKFEAGASKESKVNSARDYPGEMNTNQVS 122

Query: 344 KYSYHXXXXXXXXXXXXXXXXXXVLRIKEHLSKTEEESEDMILESLRRLKLMTLSVETLQ 165
            YSY                   V RIK+     EEES+ ++ +SLRRL+LM L+V+ L+
Sbjct: 123 NYSYGEAEALTDEIEKESQYVEEVFRIKDIFLNYEEESDTVLFDSLRRLQLMELTVDLLK 182

Query: 164 ATKIGMEVACLRKHKSKRISSFSRTLVKEWKDLVDKWCSVVPDVIGGEGTPESM 3
           AT+IG  V  LRKH S+ I   +RTL+  WK +VD+W      + G EGTP+S+
Sbjct: 183 ATEIGKAVNPLRKHGSRDICQLARTLIDGWKQMVDEWVKDTTAIAGSEGTPDSV 236