BLASTX nr result
ID: Coptis23_contig00037548
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00037548 (368 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi... 176 1e-42 emb|CBI30973.3| unnamed protein product [Vitis vinifera] 176 1e-42 ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|2... 169 3e-40 ref|XP_002521729.1| pentatricopeptide repeat-containing protein,... 159 3e-37 ref|XP_003612374.1| Pentatricopeptide repeat-containing protein ... 145 3e-33 >ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525, mitochondrial-like [Vitis vinifera] Length = 686 Score = 176 bits (447), Expect = 1e-42 Identities = 78/117 (66%), Positives = 97/117 (82%) Frame = -1 Query: 368 LGFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYF 189 LGFC EG +G+AKR+YDQMI+EG +PS LVY LI+ CQ G+VRE+FEL+NEMV H YF Sbjct: 517 LGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYF 576 Query: 188 PVASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRA 18 P A TFNALIS FC QGK+ +ALKL+E+MVG+GC P +GSYSP++D LC +GDFQ+A Sbjct: 577 PTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKA 633 Score = 73.6 bits (179), Expect = 2e-11 Identities = 38/111 (34%), Positives = 59/111 (53%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 G C +G+A ++ M G P+ ++Y T+I+ +C+ G V + LMNEMV P Sbjct: 242 GLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----P 297 Query: 185 VASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRG 33 TFN LIS +C + + AL L+E+ G P V + + ++ LCK G Sbjct: 298 SDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAG 348 Score = 72.8 bits (177), Expect = 3e-11 Identities = 31/104 (29%), Positives = 58/104 (55%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 GFC++G V EA + ++M++ G P+A + LI+ C QG V + +LM +MV P Sbjct: 553 GFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLP 612 Query: 185 VASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLI 54 +++ ++ CN+G A++L +MV K P +++ ++ Sbjct: 613 DMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 656 Score = 56.6 bits (135), Expect = 2e-06 Identities = 29/109 (26%), Positives = 49/109 (44%) Frame = -1 Query: 359 CEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFPVA 180 C+ G V E + +++ G + + Y TLI C G + ++ +M P Sbjct: 345 CKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNV 404 Query: 179 STFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRG 33 T+N L S +C+ G +++A+ L +M G +Y LI LC G Sbjct: 405 DTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGG 453 Score = 54.7 bits (130), Expect = 8e-06 Identities = 28/110 (25%), Positives = 52/110 (47%) Frame = -1 Query: 362 FCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFPV 183 +C+E + +A + ++ G +P + ++ +C+ G V E E++ + S Sbjct: 309 YCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVD 368 Query: 182 ASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRG 33 +N LI FC GK +++++M KGC P V +Y+ L C G Sbjct: 369 VVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSG 418 >emb|CBI30973.3| unnamed protein product [Vitis vinifera] Length = 722 Score = 176 bits (447), Expect = 1e-42 Identities = 78/117 (66%), Positives = 97/117 (82%) Frame = -1 Query: 368 LGFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYF 189 LGFC EG +G+AKR+YDQMI+EG +PS LVY LI+ CQ G+VRE+FEL+NEMV H YF Sbjct: 365 LGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYF 424 Query: 188 PVASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRA 18 P A TFNALIS FC QGK+ +ALKL+E+MVG+GC P +GSYSP++D LC +GDFQ+A Sbjct: 425 PTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKA 481 Score = 73.6 bits (179), Expect = 2e-11 Identities = 38/111 (34%), Positives = 59/111 (53%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 G C +G+A ++ M G P+ ++Y T+I+ +C+ G V + LMNEMV P Sbjct: 90 GLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----P 145 Query: 185 VASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRG 33 TFN LIS +C + + AL L+E+ G P V + + ++ LCK G Sbjct: 146 SDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAG 196 Score = 72.8 bits (177), Expect = 3e-11 Identities = 31/104 (29%), Positives = 58/104 (55%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 GFC++G V EA + ++M++ G P+A + LI+ C QG V + +LM +MV P Sbjct: 401 GFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLP 460 Query: 185 VASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLI 54 +++ ++ CN+G A++L +MV K P +++ ++ Sbjct: 461 DMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 504 Score = 56.6 bits (135), Expect = 2e-06 Identities = 29/109 (26%), Positives = 49/109 (44%) Frame = -1 Query: 359 CEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFPVA 180 C+ G V E + +++ G + + Y TLI C G + ++ +M P Sbjct: 193 CKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNV 252 Query: 179 STFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRG 33 T+N L S +C+ G +++A+ L +M G +Y LI LC G Sbjct: 253 DTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGG 301 Score = 54.7 bits (130), Expect = 8e-06 Identities = 28/110 (25%), Positives = 52/110 (47%) Frame = -1 Query: 362 FCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFPV 183 +C+E + +A + ++ G +P + ++ +C+ G V E E++ + S Sbjct: 157 YCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVD 216 Query: 182 ASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRG 33 +N LI FC GK +++++M KGC P V +Y+ L C G Sbjct: 217 VVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSG 266 >ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa] Length = 584 Score = 169 bits (427), Expect = 3e-40 Identities = 81/121 (66%), Positives = 95/121 (78%) Frame = -1 Query: 368 LGFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYF 189 LGFCEEG + EAKR+YDQM EG +PSALVY+ LI+ CQ+G VRE+ ELMNEMV YF Sbjct: 438 LGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYF 497 Query: 188 PVASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGF 9 PVASTFNALIS FC GK +ALKL+E+MVG+GC P GSYSPLID LC++ FQ+AA Sbjct: 498 PVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASL 557 Query: 8 L 6 L Sbjct: 558 L 558 Score = 63.5 bits (153), Expect = 2e-08 Identities = 36/109 (33%), Positives = 53/109 (48%) Frame = -1 Query: 359 CEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFPVA 180 C G V EA I +++ +G + + + TLI C+ G V+ L+ EM P A Sbjct: 266 CNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNA 325 Query: 179 STFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRG 33 T+NALIS FC G + +AL + +M G ++ LI L RG Sbjct: 326 DTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRG 374 Score = 62.4 bits (150), Expect = 4e-08 Identities = 35/120 (29%), Positives = 56/120 (46%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 G C +GE ++ + G P+ ++Y TL++ +C G V + LMNE+ P Sbjct: 163 GLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE----P 218 Query: 185 VASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGFL 6 TFN LI +C + AL L+E+ G P V + + +++ LC G A L Sbjct: 219 NDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEIL 278 Score = 61.6 bits (148), Expect = 6e-08 Identities = 32/116 (27%), Positives = 54/116 (46%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 G+C+E +A + ++ G +P + ++ +C G V E+ E++ + S Sbjct: 229 GYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVV 288 Query: 185 VASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRA 18 N LI FC GK+ L++EM KGC P +Y+ LI C+ G + A Sbjct: 289 DVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESA 344 Score = 59.7 bits (143), Expect = 2e-07 Identities = 31/110 (28%), Positives = 53/110 (48%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 GFC+EG V EA + ++M+ G P A + LI+ C+ G + +L+ +MV P Sbjct: 474 GFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVP 533 Query: 185 VASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKR 36 +++ LI C + A L+ +MV G P ++ L L ++ Sbjct: 534 DTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLFHCLSQQ 583 >ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 629 Score = 159 bits (401), Expect = 3e-37 Identities = 72/117 (61%), Positives = 93/117 (79%) Frame = -1 Query: 368 LGFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYF 189 LGFCE+G V AK ++DQMI EG P+ LVY+ L++ CQ+G++RE+FELMNEMV H YF Sbjct: 462 LGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYF 521 Query: 188 PVASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRA 18 VAS FNALI FC QGK +ALKL+++MVG+GC P G+YSPLID LC++G+FQ+A Sbjct: 522 LVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKA 578 Score = 67.4 bits (163), Expect = 1e-09 Identities = 33/109 (30%), Positives = 56/109 (51%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 GFC+EG + EA + ++M+ G A + LI+ C QG + +L+++MV P Sbjct: 498 GFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVP 557 Query: 185 VASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCK 39 T++ LI C +G AL + +M+ KG P +++ L+ L K Sbjct: 558 DRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSK 606 Score = 66.6 bits (161), Expect = 2e-09 Identities = 37/120 (30%), Positives = 60/120 (50%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 G C +G+ R+ M G P+A+VY TL++ +C+ G V + LM+E+ P Sbjct: 187 GLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEE----P 242 Query: 185 VASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGFL 6 TFN LI+ +C + + AL L+E+ G P V + + +++ LC G A L Sbjct: 243 NDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEML 302 Score = 62.0 bits (149), Expect = 5e-08 Identities = 32/115 (27%), Positives = 55/115 (47%) Frame = -1 Query: 362 FCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFPV 183 +C+E + +A + ++ G +P + ++ +C G V E+ E++ + Sbjct: 254 YCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVD 313 Query: 182 ASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRA 18 +N L+ FC GKI A + ++EM KGC P V +Y+ LI C G F A Sbjct: 314 VVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMA 368 Score = 58.2 bits (139), Expect = 7e-07 Identities = 30/118 (25%), Positives = 61/118 (51%) Frame = -1 Query: 359 CEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFPVA 180 C+ G VG A+ + D++ E P+ + + LI C++ ++ ++ L+ + S + P Sbjct: 224 CKNGKVGRARSLMDEIEE----PNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDV 279 Query: 179 STFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGFL 6 T ++ CN G++ A++++E + KG V +Y+ L+ C+ G + A FL Sbjct: 280 VTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFL 337 Score = 58.2 bits (139), Expect = 7e-07 Identities = 31/105 (29%), Positives = 49/105 (46%) Frame = -1 Query: 359 CEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFPVA 180 C G V EA + +++ +G L + Y TL+ C+ G ++ + + EM P Sbjct: 290 CNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNV 349 Query: 179 STFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTL 45 T+N LIS FC+ G + AL + +M G +Y LI L Sbjct: 350 ETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGL 394 >ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 620 Score = 145 bits (367), Expect = 3e-33 Identities = 63/114 (55%), Positives = 89/114 (78%) Frame = -1 Query: 359 CEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFPVA 180 C+EG + +AK IYD+MI+EG +PS LVY +L++ Q G +RE+ EL+NEM+S+ FP+A Sbjct: 464 CKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIA 523 Query: 179 STFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRA 18 STFNA+I+EFC QGKI +ALK +E++ +GC P +YSPLID LC++GD Q+A Sbjct: 524 STFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKA 577 Score = 65.9 bits (159), Expect = 3e-09 Identities = 37/120 (30%), Positives = 59/120 (49%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 G C +GE ++ + G P+ ++Y TL++ +C+ G V + LMNEMV P Sbjct: 186 GLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEMVD----P 241 Query: 185 VASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGFL 6 TFN LIS + + + AL L+E+ P V + + +++ LC G AA L Sbjct: 242 NEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVL 301 Score = 58.9 bits (141), Expect = 4e-07 Identities = 32/109 (29%), Positives = 48/109 (44%) Frame = -1 Query: 359 CEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFPVA 180 C G V EA + +++ G A+ Y TLI C G V+ + +M + Y P Sbjct: 289 CNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNV 348 Query: 179 STFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRG 33 T+N LI FC ++ AL L +M G ++ +I LC G Sbjct: 349 DTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEG 397 Score = 56.6 bits (135), Expect = 2e-06 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 2/123 (1%) Frame = -1 Query: 365 GFCEEGVVGEAKRIYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVSHAYFP 186 GFC G V QM +G LP+ Y LI C+ + + +L N+M + Sbjct: 322 GFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINR 381 Query: 185 VASTFNALISEFCNQGKINNALKLIE--EMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAG 12 TF+ +I C++G+I + ++E E +G K + Y+ +I L K+ F A+ Sbjct: 382 NFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASE 441 Query: 11 FLS 3 FL+ Sbjct: 442 FLA 444