BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037538
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABZ10949.1| fusion protein [Southern tomato virus]                 164   5e-39
ref|YP_002321509.1| fusion protein p122 [Southern tomato virus] ...   164   5e-39
ref|YP_003868436.1| putative fusion protein [Rhododendron virus ...   149   3e-34
ref|YP_003934623.1| fusion protein [Blueberry latent virus] gi|2...   124   8e-27
gb|ADO14118.1| fusion protein [Blueberry latent virus]                124   1e-26

>gb|ABZ10949.1| fusion protein [Southern tomato virus]
          Length = 1062

 Score =  164 bits (416), Expect = 5e-39
 Identities = 85/166 (51%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
 Frame = -3

Query: 481  FRNTLVRASSDWVHFWQEIEQASVIVELDWKKFDMKRLKEDILFMIDVICACFEPKNERE 302
            FRNT+VRASSDW+HFW E+++A+V VELDW KFD +R  ED+ FMI VIC+CF PK+E E
Sbjct: 588  FRNTVVRASSDWMHFWDEVKEAAVCVELDWSKFDRERPSEDLDFMIKVICSCFRPKDEVE 647

Query: 301  RLLMKGYKAV--GAFISRK-----GNCYR*WWCIHF*WDDASGSLWTGWLDTALNILYLN 143
              L++GY      A + R+     G        IH      SGSLWTGWLDTALNILY+ 
Sbjct: 648  AKLLRGYGVCMRRALVERRLITDDGG------VIHIDGMVPSGSLWTGWLDTALNILYIK 701

Query: 142  AALTYMGFTNANASLNCAGDDNLTLFFEDPGDEKLMQLKKLLNEWF 5
            + L  +      A   CAGDDNLT+F +DPGDE L +++  LN++F
Sbjct: 702  SVLRSIDILEEEAVPKCAGDDNLTVFSKDPGDEVLEEMRVKLNDYF 747


>ref|YP_002321509.1| fusion protein p122 [Southern tomato virus]
            gi|133711705|gb|ABO36238.1| fusion protein p122 [Southern
            tomato virus]
          Length = 1062

 Score =  164 bits (416), Expect = 5e-39
 Identities = 85/166 (51%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
 Frame = -3

Query: 481  FRNTLVRASSDWVHFWQEIEQASVIVELDWKKFDMKRLKEDILFMIDVICACFEPKNERE 302
            FRNT+VRASSDW+HFW E+++A+V VELDW KFD +R  ED+ FMI VIC+CF PK+E E
Sbjct: 588  FRNTVVRASSDWMHFWDEVKEAAVCVELDWSKFDRERPSEDLDFMIKVICSCFRPKDEVE 647

Query: 301  RLLMKGYKAV--GAFISRK-----GNCYR*WWCIHF*WDDASGSLWTGWLDTALNILYLN 143
              L++GY      A + R+     G        IH      SGSLWTGWLDTALNILY+ 
Sbjct: 648  AKLLRGYGVCMRRALVERRLITDDGG------VIHIDGMVPSGSLWTGWLDTALNILYIK 701

Query: 142  AALTYMGFTNANASLNCAGDDNLTLFFEDPGDEKLMQLKKLLNEWF 5
            + L  +      A   CAGDDNLT+F +DPGDE L +++  LN++F
Sbjct: 702  SVLRSIDILEEEAVPKCAGDDNLTVFSKDPGDEVLEEMRVKLNDYF 747


>ref|YP_003868436.1| putative fusion protein [Rhododendron virus A]
            gi|304557388|gb|ADM36020.1| putative fusion protein
            [Rhododendron virus A]
          Length = 1077

 Score =  149 bits (375), Expect = 3e-34
 Identities = 82/173 (47%), Positives = 101/173 (58%), Gaps = 14/173 (8%)
 Frame = -3

Query: 481  FRNTLVRASSDWVHFWQEIEQASVIVELDWKKFDMKRLKEDILFMIDVICACFEPKNERE 302
            FRNT VRASSDW   + E+E+A  IVELDW KFD +R   DILF+I VI +CFEP+N RE
Sbjct: 601  FRNTTVRASSDWGLLYSEVERAKCIVELDWSKFDRERPSRDILFVIKVIISCFEPRNGRE 660

Query: 301  RLLMKGYKAV--------------GAFISRKGNCYR*WWCIHF*WDDASGSLWTGWLDTA 164
            R L++ Y+ +              G  +  +G                SGSLWTGWLDTA
Sbjct: 661  RRLLEAYEIMLERALVHRLLLTDAGGVLEMEGMV-------------PSGSLWTGWLDTA 707

Query: 163  LNILYLNAALTYMGFTNANASLNCAGDDNLTLFFEDPGDEKLMQLKKLLNEWF 5
            +NILY+ AA    G  +   S  CAGDDNLTLF+ED  D  L  +K+ LN WF
Sbjct: 708  MNILYIRAACLGAGIASDLYSSRCAGDDNLTLFWEDQSDGILGLVKQHLNNWF 760


>ref|YP_003934623.1| fusion protein [Blueberry latent virus] gi|269850216|gb|ABO36236.2|
            fusion protein [Blueberry latent virus]
            gi|308097096|gb|ADO14116.1| fusion protein [Blueberry
            latent virus] gi|308097102|gb|ADO14120.1| fusion protein
            [Blueberry latent virus] gi|339895714|dbj|BAK52524.1|
            fusion protein [Blueberry latent virus]
          Length = 1054

 Score =  124 bits (311), Expect = 8e-27
 Identities = 70/166 (42%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
 Frame = -3

Query: 481  FRNTLVRASSDWVHFWQEIEQASVIVELDWKKFDMKRLKEDILFMIDVICACFEPKNERE 302
            +RN L+RASSDW   ++E+ +A V+VELDWKKFD +R  + I F IDVI +CF P+  RE
Sbjct: 578  WRNYLIRASSDWGKMYKEMRKAKVVVELDWKKFDRERPADHISFFIDVILSCFAPRTTRE 637

Query: 301  RLLMKGYKAV-------GAFISRKGNCYR*WWCIHF*WDDASGSLWTGWLDTALNILYLN 143
              L+  Y+            ++  G        +       SGSLWTG + T LNILY+ 
Sbjct: 638  EKLLGAYRRAMENALLHRVLVTDDGGVLTVDGMV------PSGSLWTGIIGTGLNILYIG 691

Query: 142  AALTYMGFTNANASLNCAGDDNLTLFFEDPGDEKLMQLKKLLNEWF 5
             AL+ +G +  N    CAGDDNLT F  D GD    +L+  LNE F
Sbjct: 692  YALSDIGISPLNYVPKCAGDDNLTFFSRDYGDAAFKRLRVKLNEMF 737


>gb|ADO14118.1| fusion protein [Blueberry latent virus]
          Length = 1054

 Score =  124 bits (310), Expect = 1e-26
 Identities = 70/166 (42%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
 Frame = -3

Query: 481  FRNTLVRASSDWVHFWQEIEQASVIVELDWKKFDMKRLKEDILFMIDVICACFEPKNERE 302
            +RN L+RASSDW   ++E+ +A V+VELDWKKFD +R  + I F IDVI +CF P+  RE
Sbjct: 578  WRNYLIRASSDWGKMYKEMRKARVVVELDWKKFDRERPADHISFFIDVILSCFAPRTTRE 637

Query: 301  RLLMKGYKAV-------GAFISRKGNCYR*WWCIHF*WDDASGSLWTGWLDTALNILYLN 143
              L+  Y+            ++  G        +       SGSLWTG + T LNILY+ 
Sbjct: 638  EKLLGAYRRAMENALLHRVLVTDDGGVLTVDGMV------PSGSLWTGIIGTGLNILYIG 691

Query: 142  AALTYMGFTNANASLNCAGDDNLTLFFEDPGDEKLMQLKKLLNEWF 5
             AL+ +G +  N    CAGDDNLT F  D GD    +L+  LNE F
Sbjct: 692  YALSDIGISPLNYVPKCAGDDNLTFFSRDYGDAAFKRLRVKLNEMF 737