BLASTX nr result

ID: Coptis23_contig00037534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037534
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279543.2| PREDICTED: uncharacterized protein LOC100253...   108   6e-22
emb|CBI16864.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|NP_197106.1| gamete-expressed 3 [Arabidopsis thaliana] gi|75...    98   6e-19
ref|XP_002871699.1| hypothetical protein ARALYDRAFT_488440 [Arab...    97   1e-18
ref|XP_003637480.1| hypothetical protein MTR_087s0018, partial [...    93   2e-17

>ref|XP_002279543.2| PREDICTED: uncharacterized protein LOC100253124 [Vitis vinifera]
          Length = 647

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/79 (60%), Positives = 65/79 (82%)
 Frame = +3

Query: 6   HFALDERILLAFIAAANVGSSMACRSTSQKTSSTCIQAKIRHLSIYTGNERAILFFLLFE 185
           +F LDE +LLAF+AA+ +G+ + CR+T QK +++C +A+ ++LSIYTGNERAIL FLLFE
Sbjct: 374 NFVLDESVLLAFVAASKIGNPLPCRTTYQKLAASCSEARPKYLSIYTGNERAILLFLLFE 433

Query: 186 TVVLALLVVLIRFCCIFWR 242
           + VL LL  L+RFCCIFWR
Sbjct: 434 SAVLVLLAGLVRFCCIFWR 452


>emb|CBI16864.3| unnamed protein product [Vitis vinifera]
          Length = 1165

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/79 (60%), Positives = 65/79 (82%)
 Frame = +3

Query: 6   HFALDERILLAFIAAANVGSSMACRSTSQKTSSTCIQAKIRHLSIYTGNERAILFFLLFE 185
           +F LDE +LLAF+AA+ +G+ + CR+T QK +++C +A+ ++LSIYTGNERAIL FLLFE
Sbjct: 292 NFVLDESVLLAFVAASKIGNPLPCRTTYQKLAASCSEARPKYLSIYTGNERAILLFLLFE 351

Query: 186 TVVLALLVVLIRFCCIFWR 242
           + VL LL  L+RFCCIFWR
Sbjct: 352 SAVLVLLAGLVRFCCIFWR 370


>ref|NP_197106.1| gamete-expressed 3 [Arabidopsis thaliana]
           gi|75174175|sp|Q9LFS2.1|GEX3_ARATH RecName: Full=Protein
           GAMETE EXPRESSED 3; Flags: Precursor
           gi|9755648|emb|CAC01801.1| hypothetical protein
           [Arabidopsis thaliana] gi|332004852|gb|AED92235.1|
           gamete-expressed 3 [Arabidopsis thaliana]
          Length = 641

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/79 (56%), Positives = 58/79 (73%)
 Frame = +3

Query: 6   HFALDERILLAFIAAANVGSSMACRSTSQKTSSTCIQAKIRHLSIYTGNERAILFFLLFE 185
           HF LDERI LAF+AA++ G+   CRS  +K SS+C  A+  HL IY GNERAI++FLLFE
Sbjct: 389 HFVLDERIALAFVAASSSGNPFRCRSKHEKLSSSCSFAEPEHLDIYIGNERAIIWFLLFE 448

Query: 186 TVVLALLVVLIRFCCIFWR 242
            V++ L   L+RFC IFW+
Sbjct: 449 FVIMVLFAALVRFCFIFWK 467


>ref|XP_002871699.1| hypothetical protein ARALYDRAFT_488440 [Arabidopsis lyrata subsp.
           lyrata] gi|297317536|gb|EFH47958.1| hypothetical protein
           ARALYDRAFT_488440 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/79 (55%), Positives = 59/79 (74%)
 Frame = +3

Query: 6   HFALDERILLAFIAAANVGSSMACRSTSQKTSSTCIQAKIRHLSIYTGNERAILFFLLFE 185
           HF LDERI+LAF+AA++ G+   CRS  +K SS+C  ++  HL IY GNERAI++FLLFE
Sbjct: 383 HFLLDERIVLAFVAASSSGNPFRCRSKHEKLSSSCSFSEPEHLDIYIGNERAIIWFLLFE 442

Query: 186 TVVLALLVVLIRFCCIFWR 242
            V++ L   L+RFC IFW+
Sbjct: 443 FVIIVLFAALVRFCFIFWK 461


>ref|XP_003637480.1| hypothetical protein MTR_087s0018, partial [Medicago truncatula]
           gi|355503415|gb|AES84618.1| hypothetical protein
           MTR_087s0018, partial [Medicago truncatula]
          Length = 543

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/77 (54%), Positives = 59/77 (76%)
 Frame = +3

Query: 9   FALDERILLAFIAAANVGSSMACRSTSQKTSSTCIQAKIRHLSIYTGNERAILFFLLFET 188
           F ++E ILL FIAA+ V + + CR+T QK +S+C QA+ + ++IY+GNER I FFLLFE+
Sbjct: 405 FVVNEEILLTFIAASKVDTPLQCRTTGQKLASSCSQARNKLVNIYSGNERTIEFFLLFES 464

Query: 189 VVLALLVVLIRFCCIFW 239
            +L LL+ L+RFCC FW
Sbjct: 465 FLLVLLIGLVRFCCTFW 481


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