BLASTX nr result

ID: Coptis23_contig00037511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037511
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635044.1| PREDICTED: calcium-activated outward-rectify...   113   2e-23
ref|XP_002264798.1| PREDICTED: calcium-activated outward-rectify...   109   3e-22
ref|XP_003635043.1| PREDICTED: calcium-activated outward-rectify...   108   6e-22
emb|CAN63132.1| hypothetical protein VITISV_001459 [Vitis vinifera]   108   6e-22
gb|AAF97863.1| outward-rectifying potassium channel KCO1 [Eucaly...   107   8e-22

>ref|XP_003635044.1| PREDICTED: calcium-activated outward-rectifying potassium channel
           1-like [Vitis vinifera] gi|297736715|emb|CBI25751.3|
           unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  113 bits (282), Expect = 2e-23
 Identities = 63/131 (48%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
 Frame = -3

Query: 385 MDSNDAKKPTITALIDPPRPSQTKDIKRR-YRRCKSAPTEFV-FPGKDGGTDLP--KSIF 218
           M  ++AK+  ++  +DP   +++  +KRR  RRC SAP   +   G +G   LP  KS+F
Sbjct: 1   MADDNAKQSLLSETVDPSHLNESNALKRRKIRRCGSAPLSVMNCSGHNGIGSLPHLKSMF 60

Query: 217 TKFHPSFWQXXXXXXXXXXXXXLCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLV 38
            K  PSF Q             LCFYL + QIKG+KTNG LDA Y C+VTMTTVGYGDLV
Sbjct: 61  VKLEPSFKQVFILLAAYLAVGTLCFYLIRDQIKGRKTNGVLDAVYFCVVTMTTVGYGDLV 120

Query: 37  PNSIATKLLAC 5
           P++I  KLLAC
Sbjct: 121 PDTILAKLLAC 131


>ref|XP_002264798.1| PREDICTED: calcium-activated outward-rectifying potassium channel 1
           [Vitis vinifera] gi|296089904|emb|CBI39723.3| unnamed
           protein product [Vitis vinifera]
          Length = 350

 Score =  109 bits (272), Expect = 3e-22
 Identities = 62/133 (46%), Positives = 81/133 (60%), Gaps = 5/133 (3%)
 Frame = -3

Query: 385 MDSNDAKKPTITALIDP-PRPSQTKDIKR-RYRRCKSAPTEF-VFPGKDGGTDLPKS--I 221
           MD   A KP++  L++P P+ +Q   +KR RYRRC+SAP      P   G   L +S  I
Sbjct: 1   MDHGAAAKPSVLGLLNPSPQTNQKASLKRKRYRRCRSAPVAACTHPHPAGPDSLHRSQII 60

Query: 220 FTKFHPSFWQXXXXXXXXXXXXXLCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDL 41
             K HP+  +             + FYL +  ++GKKTNG +DA Y CIVTM+TVGYGD+
Sbjct: 61  SRKLHPNVVKVIAVLALYLGAGTVIFYLTRHHMRGKKTNGVVDAVYFCIVTMSTVGYGDI 120

Query: 40  VPNSIATKLLACA 2
           VPNS+ATKLLACA
Sbjct: 121 VPNSVATKLLACA 133


>ref|XP_003635043.1| PREDICTED: calcium-activated outward-rectifying potassium channel
           1-like [Vitis vinifera] gi|297736711|emb|CBI25747.3|
           unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/131 (46%), Positives = 79/131 (60%), Gaps = 4/131 (3%)
 Frame = -3

Query: 385 MDSNDAKKPTITALIDPPRPSQTKDIKRR-YRRCKSAPTEFV-FPGKDGGTDLP--KSIF 218
           M  +DAK+  ++  +D    ++   +KRR   RC SAP   +   G++G   LP  +S+F
Sbjct: 1   MADDDAKQSLLSETVDSSHLNEINALKRRKIYRCGSAPLSVMNCSGRNGIGSLPHLESMF 60

Query: 217 TKFHPSFWQXXXXXXXXXXXXXLCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLV 38
            K  PSF Q             LCFYL + QIKG+KTNG LDA Y C+VTMTTVGYGDLV
Sbjct: 61  VKLEPSFKQVFILLAAYLAVGTLCFYLIRDQIKGRKTNGVLDAVYFCVVTMTTVGYGDLV 120

Query: 37  PNSIATKLLAC 5
           P++I  KLLAC
Sbjct: 121 PDTILAKLLAC 131


>emb|CAN63132.1| hypothetical protein VITISV_001459 [Vitis vinifera]
          Length = 432

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/131 (46%), Positives = 79/131 (60%), Gaps = 4/131 (3%)
 Frame = -3

Query: 385 MDSNDAKKPTITALIDPPRPSQTKDIKRR-YRRCKSAPTEFV-FPGKDGGTDLP--KSIF 218
           M  +DAK+  ++  +D    ++   +KRR   RC SAP   +   G++G   LP  +S+F
Sbjct: 1   MADDDAKQSLLSETVDSSHLNEINALKRRKIYRCGSAPLSVMNCSGRNGIGSLPHLESMF 60

Query: 217 TKFHPSFWQXXXXXXXXXXXXXLCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLV 38
            K  PSF Q             LCFYL + QIKG+KTNG LDA Y C+VTMTTVGYGDLV
Sbjct: 61  VKLEPSFKQVFILLAAYLAVGTLCFYLIRDQIKGRKTNGVLDAVYFCVVTMTTVGYGDLV 120

Query: 37  PNSIATKLLAC 5
           P++I  KLLAC
Sbjct: 121 PDTILAKLLAC 131


>gb|AAF97863.1| outward-rectifying potassium channel KCO1 [Eucalyptus
           camaldulensis]
          Length = 348

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
 Frame = -3

Query: 385 MDSNDAKKPTITALIDPPRPSQTKDIKRRYRRCKSAPTEFVFPGK---DGGTDLPKSIFT 215
           MD+N  K+P ++  ++ P+  + +  + R RRCKSAP     P +   +G      SI  
Sbjct: 1   MDANGVKQPLLSKPLNSPQTDKKELKRNRLRRCKSAPLAEAVPQEANLNGPVQPSNSILR 60

Query: 214 KFHPSFWQXXXXXXXXXXXXXLCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLVP 35
             HPSF +             +CFYL +++I G+KTN   DA Y CIVTMTTVGYGDLVP
Sbjct: 61  NLHPSFKRVAIILVFYLGIGTMCFYLVRNEIDGEKTNDLFDAVYFCIVTMTTVGYGDLVP 120

Query: 34  NSIATKLLACA 2
            S  TKLLACA
Sbjct: 121 GSALTKLLACA 131


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