BLASTX nr result

ID: Coptis23_contig00037494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037494
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine l...   167   8e-40
emb|CBI22661.3| unnamed protein product [Vitis vinifera]              167   8e-40
dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitre...   124   6e-27
ref|XP_001776739.1| predicted protein [Physcomitrella patens sub...   124   6e-27
ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Sela...   115   5e-24

>ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine ligase-like [Vitis
           vinifera]
          Length = 541

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/117 (67%), Positives = 97/117 (82%)
 Frame = -1

Query: 355 HNVLNSLAVIAAVRALINDYWPTQRLIDCIRLHLHNFIGVSRRFEMIGIFNKCHIYDDYA 176
           HNVLNSLAVIA V AL++D   +   I+C+++HL+NF+GVSRRFE+IG    C IYDDYA
Sbjct: 327 HNVLNSLAVIATVMALVSDGRQSYESINCVKIHLNNFVGVSRRFELIGTVCGCLIYDDYA 386

Query: 175 HHPTEVRAVIQAARQRFPLKALWVIFQPHTFSRLATFLKDFATALGDADRVVITKVY 5
           HHPTEVRAV+QAARQRFPLKAL V+FQPHT+SRLA    DFATA  DAD+V++T++Y
Sbjct: 387 HHPTEVRAVLQAARQRFPLKALLVVFQPHTYSRLAALKSDFATAFSDADQVLVTEIY 443


>emb|CBI22661.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/117 (67%), Positives = 97/117 (82%)
 Frame = -1

Query: 355 HNVLNSLAVIAAVRALINDYWPTQRLIDCIRLHLHNFIGVSRRFEMIGIFNKCHIYDDYA 176
           HNVLNSLAVIA V AL++D   +   I+C+++HL+NF+GVSRRFE+IG    C IYDDYA
Sbjct: 354 HNVLNSLAVIATVMALVSDGRQSYESINCVKIHLNNFVGVSRRFELIGTVCGCLIYDDYA 413

Query: 175 HHPTEVRAVIQAARQRFPLKALWVIFQPHTFSRLATFLKDFATALGDADRVVITKVY 5
           HHPTEVRAV+QAARQRFPLKAL V+FQPHT+SRLA    DFATA  DAD+V++T++Y
Sbjct: 414 HHPTEVRAVLQAARQRFPLKALLVVFQPHTYSRLAALKSDFATAFSDADQVLVTEIY 470


>dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitrella patens]
          Length = 615

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/125 (52%), Positives = 81/125 (64%), Gaps = 8/125 (6%)
 Frame = -1

Query: 355 HNVLNSLAVIAAVRALINDYWPT--------QRLIDCIRLHLHNFIGVSRRFEMIGIFNK 200
           +NVLNSLAVI  +  L  +            +R  +     L  F GV RRF+ +G  + 
Sbjct: 409 YNVLNSLAVIVVMSLLAAEKESDVGAQAKLMKRTAEAAGRALGAFSGVRRRFDFVGSVHG 468

Query: 199 CHIYDDYAHHPTEVRAVIQAARQRFPLKALWVIFQPHTFSRLATFLKDFATALGDADRVV 20
           CHI DDYAHHPTEVRAV+QAARQR+  + +WVIFQPHT SRLA FL DFA A   ADRV+
Sbjct: 469 CHIIDDYAHHPTEVRAVLQAARQRYDQQPIWVIFQPHTVSRLAAFLPDFAPAFSAADRVI 528

Query: 19  ITKVY 5
           +T+VY
Sbjct: 529 VTQVY 533


>ref|XP_001776739.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162671888|gb|EDQ58433.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 680

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/125 (52%), Positives = 81/125 (64%), Gaps = 8/125 (6%)
 Frame = -1

Query: 355 HNVLNSLAVIAAVRALINDYWPT--------QRLIDCIRLHLHNFIGVSRRFEMIGIFNK 200
           +NVLNSLAVI  +  L  +            +R  +     L  F GV RRF+ +G  + 
Sbjct: 474 YNVLNSLAVIVVMSLLAAEKESDVGAQAKLMKRTAEAAGRALGAFSGVRRRFDFVGSVHG 533

Query: 199 CHIYDDYAHHPTEVRAVIQAARQRFPLKALWVIFQPHTFSRLATFLKDFATALGDADRVV 20
           CHI DDYAHHPTEVRAV+QAARQR+  + +WVIFQPHT SRLA FL DFA A   ADRV+
Sbjct: 534 CHIIDDYAHHPTEVRAVLQAARQRYDQQPIWVIFQPHTVSRLAAFLPDFAPAFSAADRVI 593

Query: 19  ITKVY 5
           +T+VY
Sbjct: 594 VTQVY 598


>ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Selaginella moellendorffii]
           gi|300165094|gb|EFJ31702.1| hypothetical protein
           SELMODRAFT_408505 [Selaginella moellendorffii]
          Length = 521

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/121 (49%), Positives = 75/121 (61%), Gaps = 10/121 (8%)
 Frame = -1

Query: 355 HNVLNSLAVIAAVRALI----------NDYWPTQRLIDCIRLHLHNFIGVSRRFEMIGIF 206
           +NVLNSLAV+AAV  L                           L +F G+ RRFE +G  
Sbjct: 317 YNVLNSLAVLAAVSLLAFKGKGSCDESGQLKAMAVAAQAASSALQSFQGLRRRFEYVGTV 376

Query: 205 NKCHIYDDYAHHPTEVRAVIQAARQRFPLKALWVIFQPHTFSRLATFLKDFATALGDADR 26
            +C IYDDYAHHPTEVRAV+QAARQRF  + +WV+FQPHT+SR+A  L+DFA A   A+R
Sbjct: 377 RRCDIYDDYAHHPTEVRAVLQAARQRFDKQPIWVVFQPHTYSRIANLLQDFAPAFSGANR 436

Query: 25  V 23
           +
Sbjct: 437 I 437


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