BLASTX nr result

ID: Coptis23_contig00037487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037487
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 ho...    86   2e-15
ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1...    81   8e-14
ref|XP_002511315.1| thyroid hormone receptor interactor, putativ...    81   1e-13
ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 ho...    80   1e-13
ref|NP_194202.3| P-loop containing nucleoside triphosphate hydro...    79   5e-13

>ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 homolog [Cucumis sativus]
           gi|449487740|ref|XP_004157777.1| PREDICTED: pachytene
           checkpoint protein 2 homolog [Cucumis sativus]
          Length = 456

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = +3

Query: 96  INEDKISVSVEVCLKVSSTARIGDVKEAVERMLEQRSLSYTDGPVSVPHGDTFLLENV 269
           +NEDKI VSVEVCLK SSTARI DV+ AVERMLE+RSLSY DGP+ VP  D FL ENV
Sbjct: 34  VNEDKILVSVEVCLKSSSTARIEDVRLAVERMLEKRSLSYVDGPIPVPLDDAFLTENV 91


>ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1|
           unknown [Populus trichocarpa]
           gi|222858748|gb|EEE96295.1| predicted protein [Populus
           trichocarpa]
          Length = 465

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/56 (73%), Positives = 45/56 (80%)
 Frame = +3

Query: 108 KISVSVEVCLKVSSTARIGDVKEAVERMLEQRSLSYTDGPVSVPHGDTFLLENVQR 275
           K  VSVEVCLK SSTAR+ DV+ AVERMLE+RSLSY DGP+ VP  D FL ENVQR
Sbjct: 46  KFLVSVEVCLKPSSTARVEDVRLAVERMLEKRSLSYVDGPIPVPFDDQFLFENVQR 101


>ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis]
           gi|223550430|gb|EEF51917.1| thyroid hormone receptor
           interactor, putative [Ricinus communis]
          Length = 460

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +3

Query: 96  INEDKISVSVEVCLKVSSTARIGDVKEAVERMLEQRSLSYTDGPVSVPHGDTFLLENVQR 275
           ++ DK  VSVEVCLK SSTAR+ D++ AVERMLE+RSLSY DGP+ VP  D +L +NVQR
Sbjct: 38  LHHDKYLVSVEVCLKPSSTARVEDIQSAVERMLEKRSLSYVDGPIPVPVDDPYLSDNVQR 97


>ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 homolog [Vitis vinifera]
           gi|297733699|emb|CBI14946.3| unnamed protein product
           [Vitis vinifera]
          Length = 455

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/60 (68%), Positives = 47/60 (78%)
 Frame = +3

Query: 96  INEDKISVSVEVCLKVSSTARIGDVKEAVERMLEQRSLSYTDGPVSVPHGDTFLLENVQR 275
           + ++K+ VSVEVCLK SSTAR  DV+ AVERMLE RSLSYTDG V V   D FL+ENVQR
Sbjct: 32  LTQEKVLVSVEVCLKASSTARSDDVRSAVERMLENRSLSYTDGSVPVSLDDPFLVENVQR 91


>ref|NP_194202.3| P-loop containing nucleoside triphosphate hydrolase-like protein
           [Arabidopsis thaliana] gi|332659545|gb|AEE84945.1|
           P-loop containing nucleoside triphosphate hydrolase-like
           protein [Arabidopsis thaliana]
          Length = 475

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +3

Query: 96  INEDKISVSVEVCLKVSSTARIGDVKEAVERMLEQRSLSYTDGPVSVPHGDTFLLENVQR 275
           ++E+K  VSVEVCLK SSTAR+ DV+ AVERMLE RS+SY DG V +P  D FL++NVQR
Sbjct: 53  LHENKFLVSVEVCLKPSSTARLEDVQRAVERMLENRSMSYADGLVLIPADDLFLVDNVQR 112


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