BLASTX nr result

ID: Coptis23_contig00037482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037482
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]         178   4e-43
gb|ACU21437.1| unknown [Glycine max]                                  175   4e-42
ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]         174   7e-42
ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]         173   1e-41
ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-...   170   1e-40

>ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 352

 Score =  178 bits (452), Expect = 4e-43
 Identities = 88/121 (72%), Positives = 105/121 (86%)
 Frame = +1

Query: 1   QVCESKFIFEARTIQRMELLVLSTLNWRMQAITPFSFMDYFLWKFNDDQPPLRSSISQSV 180
           QV ESKF+FEA+TIQRMELLVLSTL WRMQAITPF+F+DYFL K NDDQ PLRSSI +S+
Sbjct: 164 QVGESKFLFEAKTIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSI 223

Query: 181 DIILSTLKGIEHLNFRPSEVAAAVAISVLRETQTVDVDKATSCIIQHVEKERVLKCIKLI 360
            +I ST +GI+ L F+PSE+AAAVA+ V+ ETQTVD  KATS +IQHVEKER+LKC+K+I
Sbjct: 224 QLISSTARGIDFLEFKPSEIAAAVAMYVMGETQTVDTGKATSFLIQHVEKERLLKCVKMI 283

Query: 361 Q 363
           Q
Sbjct: 284 Q 284


>gb|ACU21437.1| unknown [Glycine max]
          Length = 352

 Score =  175 bits (443), Expect = 4e-42
 Identities = 86/121 (71%), Positives = 104/121 (85%)
 Frame = +1

Query: 1   QVCESKFIFEARTIQRMELLVLSTLNWRMQAITPFSFMDYFLWKFNDDQPPLRSSISQSV 180
           QV ESKF+FEA+TIQRMELLVLSTL WRMQAITPF+F+DYFL K NDDQ PLRSSI +S+
Sbjct: 164 QVGESKFLFEAKTIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSI 223

Query: 181 DIILSTLKGIEHLNFRPSEVAAAVAISVLRETQTVDVDKATSCIIQHVEKERVLKCIKLI 360
            +I ST +GI+ L F+PSE+AAAVA+ V+ ETQTVD  KA S +IQHVEKER+LKC+++I
Sbjct: 224 QLISSTARGIDFLEFKPSEIAAAVAMYVMGETQTVDTGKAISVLIQHVEKERLLKCVQMI 283

Query: 361 Q 363
           Q
Sbjct: 284 Q 284


>ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 357

 Score =  174 bits (441), Expect = 7e-42
 Identities = 88/121 (72%), Positives = 105/121 (86%)
 Frame = +1

Query: 1   QVCESKFIFEARTIQRMELLVLSTLNWRMQAITPFSFMDYFLWKFNDDQPPLRSSISQSV 180
           QV ESK+IFEA+TIQRMELLVLSTL WRMQAITPFSF+D+FL+K NDDQ P+ +SI QS+
Sbjct: 167 QVGESKYIFEAKTIQRMELLVLSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQSI 226

Query: 181 DIILSTLKGIEHLNFRPSEVAAAVAISVLRETQTVDVDKATSCIIQHVEKERVLKCIKLI 360
            +ILST++GI+ L FRPSE+AAAVAISV+ E QTV  +KA S +IQ VEKERVLKC+KLI
Sbjct: 227 QLILSTVRGIDFLEFRPSEIAAAVAISVVGEGQTVQTEKAISVLIQLVEKERVLKCVKLI 286

Query: 361 Q 363
           Q
Sbjct: 287 Q 287


>ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 355

 Score =  173 bits (438), Expect = 1e-41
 Identities = 87/121 (71%), Positives = 105/121 (86%)
 Frame = +1

Query: 1   QVCESKFIFEARTIQRMELLVLSTLNWRMQAITPFSFMDYFLWKFNDDQPPLRSSISQSV 180
           QV ESK+IFEA+TIQRMELLVLSTL WRMQAITPFSF+D+FL+K NDDQ P+ +SI QS+
Sbjct: 167 QVGESKYIFEAKTIQRMELLVLSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQSI 226

Query: 181 DIILSTLKGIEHLNFRPSEVAAAVAISVLRETQTVDVDKATSCIIQHVEKERVLKCIKLI 360
            +ILST++GI+ L FRPSE+AAAVAISV+ E QTV  +KA S +IQ VEKERVLKC+K+I
Sbjct: 227 QLILSTVRGIDFLEFRPSEIAAAVAISVVGEGQTVHTEKAISVLIQLVEKERVLKCVKMI 286

Query: 361 Q 363
           Q
Sbjct: 287 Q 287


>ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-like [Vitis vinifera]
          Length = 325

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/120 (69%), Positives = 103/120 (85%)
 Frame = +1

Query: 1   QVCESKFIFEARTIQRMELLVLSTLNWRMQAITPFSFMDYFLWKFNDDQPPLRSSISQSV 180
           QV ES+F+FEARTIQRMELLVL TL WRMQA+TPFSF+DYFL + NDD+ P R+SI  S+
Sbjct: 170 QVAESRFVFEARTIQRMELLVLRTLKWRMQAVTPFSFVDYFLRRINDDEFPARTSILLSI 229

Query: 181 DIILSTLKGIEHLNFRPSEVAAAVAISVLRETQTVDVDKATSCIIQHVEKERVLKCIKLI 360
            +ILST+KGI+ L FRPSE+AAAVAIS+  ETQTVD++KA S +I+ +EKERVLKCI+L+
Sbjct: 230 QLILSTVKGIDFLEFRPSEIAAAVAISIAGETQTVDIEKAISVVIEPIEKERVLKCIELM 289


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