BLASTX nr result

ID: Coptis23_contig00037467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037467
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273487.1| PREDICTED: uncharacterized protein LOC100243...    67   1e-09
emb|CAN68198.1| hypothetical protein VITISV_039762 [Vitis vinifera]    67   1e-09
ref|NP_568206.1| RING/FYVE/PHD zinc finger-containing protein [A...    63   2e-08
ref|XP_002871357.1| zinc finger family protein [Arabidopsis lyra...    63   2e-08
ref|NP_001078548.1| RING/FYVE/PHD zinc finger-containing protein...    63   2e-08

>ref|XP_002273487.1| PREDICTED: uncharacterized protein LOC100243998 [Vitis vinifera]
          Length = 365

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/55 (58%), Positives = 40/55 (72%)
 Frame = +1

Query: 28  STDKDGGLPICRVCQCSESDSKGEAALGYLDIFPPLQELPKIDVDRRSNSKDTPK 192
           S DK+ GL  CRVCQC+ESD +GEAALG+L I PP+QE  K D   ++NSK+  K
Sbjct: 35  SIDKEAGLATCRVCQCAESDRRGEAALGFLGITPPVQEARKSDELIKTNSKEVLK 89


>emb|CAN68198.1| hypothetical protein VITISV_039762 [Vitis vinifera]
          Length = 469

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/55 (58%), Positives = 40/55 (72%)
 Frame = +1

Query: 28  STDKDGGLPICRVCQCSESDSKGEAALGYLDIFPPLQELPKIDVDRRSNSKDTPK 192
           S DK+ GL  CRVCQC+ESD +GEAALG+L I PP+QE  K D   ++NSK+  K
Sbjct: 35  SIDKEAGLATCRVCQCAESDRRGEAALGFLGITPPVQEARKSDELIKTNSKEVLK 89


>ref|NP_568206.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
           gi|145334331|ref|NP_001078547.1| RING/FYVE/PHD zinc
           finger-containing protein [Arabidopsis thaliana]
           gi|13548333|emb|CAC35880.1| putative protein
           [Arabidopsis thaliana] gi|26451043|dbj|BAC42627.1|
           unknown protein [Arabidopsis thaliana]
           gi|94442419|gb|ABF18997.1| At5g08750 [Arabidopsis
           thaliana] gi|332003961|gb|AED91344.1| RING/FYVE/PHD zinc
           finger-containing protein [Arabidopsis thaliana]
           gi|332003962|gb|AED91345.1| RING/FYVE/PHD zinc
           finger-containing protein [Arabidopsis thaliana]
          Length = 363

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +1

Query: 10  YQAACDSTDKDGGLPICRVCQCSESDSKGEAALGYLDIFPPLQELPKIDVDRRSNS 177
           ++A   S+DKD GLP CRVCQC+ESD +G+AALG+L I PP+ E       RRSN+
Sbjct: 27  HEAPRYSSDKDTGLPTCRVCQCAESDRRGDAALGFLGITPPVSE------PRRSNA 76


>ref|XP_002871357.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317194|gb|EFH47616.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +1

Query: 10  YQAACDSTDKDGGLPICRVCQCSESDSKGEAALGYLDIFPPLQELPKIDVDRRSNS 177
           ++A   S+DKD GLP CRVCQC+ESD +G+AALG+L I PP+ E       RRSN+
Sbjct: 34  HEAPRYSSDKDTGLPTCRVCQCAESDRRGDAALGFLGITPPVSE------PRRSNA 83


>ref|NP_001078548.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
           gi|332003963|gb|AED91346.1| RING/FYVE/PHD zinc
           finger-containing protein [Arabidopsis thaliana]
          Length = 370

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +1

Query: 10  YQAACDSTDKDGGLPICRVCQCSESDSKGEAALGYLDIFPPLQELPKIDVDRRSNS 177
           ++A   S+DKD GLP CRVCQC+ESD +G+AALG+L I PP+ E       RRSN+
Sbjct: 34  HEAPRYSSDKDTGLPTCRVCQCAESDRRGDAALGFLGITPPVSE------PRRSNA 83


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