BLASTX nr result

ID: Coptis23_contig00037460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037460
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...   114   6e-24
ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...   114   6e-24
ref|XP_003525565.1| PREDICTED: uncharacterized protein LOC100814...   112   4e-23
ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794...   110   2e-22
ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arab...   109   3e-22

>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/120 (50%), Positives = 74/120 (61%)
 Frame = -1

Query: 362 AGATLVCLILILCDLGNGFRRRKSWLPCGYFXXXXXXXXXXXXXSKLPVDLTTPMPSAQD 183
           A A+L+C + +  DL +GFR RK W PC +F              KL VDL T MPS QD
Sbjct: 29  AVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNATSLTFIAVGIKLSVDLNTSMPSRQD 88

Query: 182 QLSKLTGTVFICMSMGFLMPSLGIFGEIESYSNLVALSIFVVTVVVNICIQMVTGVIFSF 3
           QL+KL+ TVF+C  MG  MPSLGI    +   NL+AL I V+T VVNICIQ+ TG I+ F
Sbjct: 89  QLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVITDVVNICIQLGTGAIYVF 148


>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/120 (50%), Positives = 74/120 (61%)
 Frame = -1

Query: 362 AGATLVCLILILCDLGNGFRRRKSWLPCGYFXXXXXXXXXXXXXSKLPVDLTTPMPSAQD 183
           A A+L+C + +  DL +GFR RK W PC +F              KL VDL T MPS QD
Sbjct: 29  AVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNATSLTFIAVGIKLSVDLNTSMPSRQD 88

Query: 182 QLSKLTGTVFICMSMGFLMPSLGIFGEIESYSNLVALSIFVVTVVVNICIQMVTGVIFSF 3
           QL+KL+ TVF+C  MG  MPSLGI    +   NL+AL I V+T VVNICIQ+ TG I+ F
Sbjct: 89  QLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVITDVVNICIQLGTGAIYVF 148


>ref|XP_003525565.1| PREDICTED: uncharacterized protein LOC100814359 [Glycine max]
          Length = 759

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/120 (47%), Positives = 74/120 (61%)
 Frame = -1

Query: 362 AGATLVCLILILCDLGNGFRRRKSWLPCGYFXXXXXXXXXXXXXSKLPVDLTTPMPSAQD 183
           A A+L CLI +  DL +G R RK W PC +F              KL VDL TPMP  +D
Sbjct: 29  AAASLACLITMAADLIHGIRGRKLWFPCKFFCLNATSLAIIAVAVKLSVDLNTPMPHRRD 88

Query: 182 QLSKLTGTVFICMSMGFLMPSLGIFGEIESYSNLVALSIFVVTVVVNICIQMVTGVIFSF 3
           QLSKL+ +  IC  M   MP+LGI    ++  NL+A++I V+T++VNICIQ VTGVI+ F
Sbjct: 89  QLSKLSSSALICTIMANSMPTLGITENKDTMMNLMAMAILVITMIVNICIQFVTGVIYVF 148


>ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794740 [Glycine max]
          Length = 760

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/120 (46%), Positives = 72/120 (60%)
 Frame = -1

Query: 362 AGATLVCLILILCDLGNGFRRRKSWLPCGYFXXXXXXXXXXXXXSKLPVDLTTPMPSAQD 183
           A A+L CLI +  DL +G R RK W PC +F              KL VDL TPMP   D
Sbjct: 29  AAASLACLIAMAADLIHGIRGRKLWFPCKFFCLNATSLAIIAVAVKLSVDLNTPMPHRHD 88

Query: 182 QLSKLTGTVFICMSMGFLMPSLGIFGEIESYSNLVALSIFVVTVVVNICIQMVTGVIFSF 3
           QLSKL+ +  IC  M   MP+LGI    ++  N +A++I V+T++VNICIQ VTGVI+ F
Sbjct: 89  QLSKLSSSALICTIMANSMPTLGITENKDTMMNFMAMAILVITMIVNICIQFVTGVIYLF 148


>ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arabidopsis lyrata subsp.
           lyrata] gi|297315950|gb|EFH46373.1| hypothetical protein
           ARALYDRAFT_493150 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/120 (46%), Positives = 72/120 (60%)
 Frame = -1

Query: 362 AGATLVCLILILCDLGNGFRRRKSWLPCGYFXXXXXXXXXXXXXSKLPVDLTTPMPSAQD 183
           A A+++C + +  DL +G R RK W PC +F              KL +DL TPMPS QD
Sbjct: 26  AAASVICGVAMFSDLLHGLRHRKFWFPCKFFSLNATTLTFISVCVKLSLDLNTPMPSRQD 85

Query: 182 QLSKLTGTVFICMSMGFLMPSLGIFGEIESYSNLVALSIFVVTVVVNICIQMVTGVIFSF 3
           QL+KL+ +VF+C  M   MPSLG     +   NLVAL I V+T VVNICIQ+ TG I+ F
Sbjct: 86  QLAKLSSSVFVCTVMANSMPSLGFMVTQDLLMNLVALGILVITDVVNICIQLGTGAIYVF 145


Top