BLASTX nr result

ID: Coptis23_contig00037459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037459
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516830.1| conserved hypothetical protein [Ricinus comm...    75   5e-12
ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_003609549.1| hypothetical protein MTR_4g118480 [Medicago ...    70   2e-10
ref|XP_003594057.1| hypothetical protein MTR_2g020850 [Medicago ...    70   2e-10

>ref|XP_002516830.1| conserved hypothetical protein [Ricinus communis]
           gi|223543918|gb|EEF45444.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 193

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 32/54 (59%), Positives = 41/54 (75%)
 Frame = +2

Query: 53  KNAEQKTFTGLSNVIKLLPSGNIFLLQLLNPLVTNNGKCKTSNKYFSFIFLGLC 214
           K+ + KTFTG  N+IKLLP+G +F+ Q LNP++TNNG C T NKY S I +GLC
Sbjct: 12  KSMKDKTFTGFGNLIKLLPTGTVFIFQFLNPVLTNNGHCHTINKYLSGILIGLC 65


>ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|222864582|gb|EEF01713.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 30/51 (58%), Positives = 41/51 (80%)
 Frame = +2

Query: 62  EQKTFTGLSNVIKLLPSGNIFLLQLLNPLVTNNGKCKTSNKYFSFIFLGLC 214
           + KTF+G+ N+IKLLP+G +F+ Q LNP++TNNG+C T NKY S I +GLC
Sbjct: 11  QDKTFSGVGNLIKLLPTGTVFMFQFLNPVLTNNGQCHTVNKYLSGILMGLC 61


>ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|222852196|gb|EEE89743.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = +2

Query: 62  EQKTFTGLSNVIKLLPSGNIFLLQLLNPLVTNNGKCKTSNKYFSFIFLGLC 214
           + KTF+G+ N++KLLP+G +F+ Q LNP++TNNG+C T NKY S I +GLC
Sbjct: 11  QDKTFSGVGNLVKLLPTGTVFMFQFLNPVLTNNGQCHTVNKYLSGILMGLC 61


>ref|XP_003609549.1| hypothetical protein MTR_4g118480 [Medicago truncatula]
           gi|355510604|gb|AES91746.1| hypothetical protein
           MTR_4g118480 [Medicago truncatula]
          Length = 217

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +2

Query: 41  TFTIKNAEQKTFTGLSNVIKLLPSGNIFLLQLLNPLVTNNGKCKTSNKYFSFIFLGLC 214
           T T  +  +K+  G+ ++IKLLP+G +FL Q LNP+VTN+G+CKTSNKY S I L +C
Sbjct: 20  TTTATSTIKKSIGGIGSLIKLLPTGTVFLFQFLNPVVTNSGRCKTSNKYLSSILLVIC 77


>ref|XP_003594057.1| hypothetical protein MTR_2g020850 [Medicago truncatula]
           gi|355483105|gb|AES64308.1| hypothetical protein
           MTR_2g020850 [Medicago truncatula]
          Length = 198

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = +2

Query: 17  NKSSSIRRTFTIKNAEQ---KTFTGLSNVIKLLPSGNIFLLQLLNPLVTNNGKCKTSNKY 187
           ++ +S  +T T K A     KTF+G+ N++KLLP+G +FL Q L+P+VTNNG C T NKY
Sbjct: 2   SEKASSSKTSTNKGASTMTGKTFSGVGNLVKLLPTGTVFLFQYLSPVVTNNGHCSTINKY 61

Query: 188 FSFIFLGLC 214
            S I L +C
Sbjct: 62  LSGILLVIC 70


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