BLASTX nr result

ID: Coptis23_contig00037440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037440
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18982.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002284567.1| PREDICTED: cyclin-A1-1-like [Vitis vinifera]       77   1e-12
ref|XP_002520329.1| cyclin A, putative [Ricinus communis] gi|223...    74   2e-11
ref|XP_002306649.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
dbj|BAE06271.1| cyclin A [Scutellaria baicalensis]                     69   5e-10

>emb|CBI18982.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/37 (91%), Positives = 37/37 (100%)
 Frame = +1

Query: 1   HNTSLPAIREKYSQHKYKFVAKKYCPPSIPSELFYDL 111
           HN+SLPAIREKYSQHKYKFVAKKYCPPSIPSELF++L
Sbjct: 512 HNSSLPAIREKYSQHKYKFVAKKYCPPSIPSELFHNL 548


>ref|XP_002284567.1| PREDICTED: cyclin-A1-1-like [Vitis vinifera]
          Length = 495

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/37 (91%), Positives = 37/37 (100%)
 Frame = +1

Query: 1   HNTSLPAIREKYSQHKYKFVAKKYCPPSIPSELFYDL 111
           HN+SLPAIREKYSQHKYKFVAKKYCPPSIPSELF++L
Sbjct: 457 HNSSLPAIREKYSQHKYKFVAKKYCPPSIPSELFHNL 493


>ref|XP_002520329.1| cyclin A, putative [Ricinus communis] gi|223540548|gb|EEF42115.1|
           cyclin A, putative [Ricinus communis]
          Length = 498

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +1

Query: 1   HNTSLPAIREKYSQHKYKFVAKKYCPPSIPSELFYD 108
           HN++LPAIREKYSQHKYKFVAKKYCPPSIP E F+D
Sbjct: 460 HNSTLPAIREKYSQHKYKFVAKKYCPPSIPQEFFHD 495


>ref|XP_002306649.1| predicted protein [Populus trichocarpa] gi|222856098|gb|EEE93645.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +1

Query: 1   HNTSLPAIREKYSQHKYKFVAKKYCPPSIPSELFYDL 111
           HN++LPAIREKYSQHKYKFVAKKYCPPSIP E F +L
Sbjct: 455 HNSTLPAIREKYSQHKYKFVAKKYCPPSIPEEFFQNL 491


>dbj|BAE06271.1| cyclin A [Scutellaria baicalensis]
          Length = 496

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +1

Query: 1   HNTSLPAIREKYSQHKYKFVAKKYCPPSIPSELFYDL 111
           HN+SLPAIREKYSQHKYKFVAKKYCP SIP E F+++
Sbjct: 458 HNSSLPAIREKYSQHKYKFVAKKYCPLSIPPEYFHNV 494


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