BLASTX nr result

ID: Coptis23_contig00037436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037436
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274551.1| PREDICTED: uncharacterized protein LOC100267...    75   4e-12
ref|XP_002528390.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002274551.1| PREDICTED: uncharacterized protein LOC100267275 [Vitis vinifera]
           gi|297743698|emb|CBI36581.3| unnamed protein product
           [Vitis vinifera]
          Length = 117

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/74 (51%), Positives = 52/74 (70%)
 Frame = +3

Query: 36  MVITQNSFLFSNPSTSLVTWRNSRKLKHTLAKKQDSTDNFKSQQQQPFLTLRVPNVFIAR 215
           M++TQ++F+F+     L   +N  K + TLA+K+D++ N  +QQQQ  L LRV N  +AR
Sbjct: 1   MLVTQDTFIFNTLPPYLFHIKNGTKFRPTLAQKRDASKNSSTQQQQSILPLRVSNTILAR 60

Query: 216 SVIAVLGLGFIDAG 257
           S IAVLGLGFIDAG
Sbjct: 61  SAIAVLGLGFIDAG 74


>ref|XP_002528390.1| conserved hypothetical protein [Ricinus communis]
           gi|223532178|gb|EEF33983.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
 Frame = +3

Query: 30  MKMVITQNSFLFSNPSTSLVTWRNSRK-----LKHTLAKKQDSTDNFKSQQQQPFLTLRV 194
           MK  +  N+ L S+ S+S + +  ++K     +  T+AKK+DS +N ++QQQ   L L++
Sbjct: 4   MKTTLFFNNSLSSSSSSSSLPYHPTKKNGQKYIIITVAKKKDSPENSRTQQQNSILPLKI 63

Query: 195 PNVFIARSVIAVLGLGFIDAG 257
               +A+S IAV GLGFIDAG
Sbjct: 64  SYRALAKSAIAVFGLGFIDAG 84


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