BLASTX nr result

ID: Coptis23_contig00037404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037404
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268413.2| PREDICTED: ethylene-responsive transcription...   161   4e-38
emb|CBI36313.3| unnamed protein product [Vitis vinifera]              161   4e-38
ref|XP_002517624.1| DNA binding protein, putative [Ricinus commu...   159   2e-37
ref|XP_003528335.1| PREDICTED: ethylene-responsive transcription...   157   6e-37
ref|NP_001148685.1| ethylene responsive element [Zea mays] gi|19...   156   1e-36

>ref|XP_002268413.2| PREDICTED: ethylene-responsive transcription factor WIN1-like
           [Vitis vinifera]
          Length = 190

 Score =  161 bits (408), Expect = 4e-38
 Identities = 82/113 (72%), Positives = 87/113 (76%)
 Frame = +3

Query: 48  MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFXXXXXXXXXXXXXXVLMSGRNAKT 227
           MVQ+KKFRGVRQRHWGSWV+EIRHPLLKRRVWLGTF              V+MSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRVWLGTFETAEEAARAYDEAAVMMSGRNAKT 60

Query: 228 NFPVVQTPAGNSMAGEGSSKSSPTSLSAILSAKLRKCCKAPSPSLTCLRLDTE 386
           NFP     A N    E SS SSPT+LSAILSAKLRKCCK+PSPSLTCLRLDTE
Sbjct: 61  NFPTAVNHANN----EESSSSSPTALSAILSAKLRKCCKSPSPSLTCLRLDTE 109


>emb|CBI36313.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score =  161 bits (408), Expect = 4e-38
 Identities = 82/113 (72%), Positives = 87/113 (76%)
 Frame = +3

Query: 48  MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFXXXXXXXXXXXXXXVLMSGRNAKT 227
           MVQ+KKFRGVRQRHWGSWV+EIRHPLLKRRVWLGTF              V+MSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRVWLGTFETAEEAARAYDEAAVMMSGRNAKT 60

Query: 228 NFPVVQTPAGNSMAGEGSSKSSPTSLSAILSAKLRKCCKAPSPSLTCLRLDTE 386
           NFP     A N    E SS SSPT+LSAILSAKLRKCCK+PSPSLTCLRLDTE
Sbjct: 61  NFPTAVNHANN----EESSSSSPTALSAILSAKLRKCCKSPSPSLTCLRLDTE 109


>ref|XP_002517624.1| DNA binding protein, putative [Ricinus communis]
           gi|223543256|gb|EEF44788.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37
 Identities = 82/117 (70%), Positives = 89/117 (76%), Gaps = 4/117 (3%)
 Frame = +3

Query: 48  MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFXXXXXXXXXXXXXXVLMSGRNAKT 227
           MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTF              VLMSGRNAKT
Sbjct: 1   MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKT 60

Query: 228 NFPVVQTPAGNS----MAGEGSSKSSPTSLSAILSAKLRKCCKAPSPSLTCLRLDTE 386
           NFPV     G++     +   SS SSP++LS+ILSAKLRKCCK+PSPSLTCLRLDTE
Sbjct: 61  NFPVSTNQEGSNSEKFSSSLSSSASSPSALSSILSAKLRKCCKSPSPSLTCLRLDTE 117


>ref|XP_003528335.1| PREDICTED: ethylene-responsive transcription factor WIN1-like
           [Glycine max]
          Length = 189

 Score =  157 bits (398), Expect = 6e-37
 Identities = 79/113 (69%), Positives = 87/113 (76%)
 Frame = +3

Query: 48  MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFXXXXXXXXXXXXXXVLMSGRNAKT 227
           MVQS+KFRGVRQR+WGSWVSEIRHPLLKRRVWLGTF              +LMSGRNAKT
Sbjct: 1   MVQSRKFRGVRQRNWGSWVSEIRHPLLKRRVWLGTFETADEAARAYDEAAILMSGRNAKT 60

Query: 228 NFPVVQTPAGNSMAGEGSSKSSPTSLSAILSAKLRKCCKAPSPSLTCLRLDTE 386
           NFPV +   GN      +S SS T+LSA+LSAKLRKCCK+PSPSLTCLRLDTE
Sbjct: 61  NFPVGENQMGNH--SSSTSSSSTTTLSAVLSAKLRKCCKSPSPSLTCLRLDTE 111


>ref|NP_001148685.1| ethylene responsive element [Zea mays] gi|195621398|gb|ACG32529.1|
           ethylene responsive element [Zea mays]
           gi|413936120|gb|AFW70671.1| putative AP2/EREBP
           transcription factor superfamily protein [Zea mays]
          Length = 213

 Score =  156 bits (395), Expect = 1e-36
 Identities = 82/123 (66%), Positives = 86/123 (69%), Gaps = 7/123 (5%)
 Frame = +3

Query: 39  SHNMVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFXXXXXXXXXXXXXXVLMSGRN 218
           S  MVQ KKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTF              VLMSGRN
Sbjct: 7   SRKMVQPKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRN 66

Query: 219 AKTNFPVVQTPAGNSMAGEG-------SSKSSPTSLSAILSAKLRKCCKAPSPSLTCLRL 377
           AKTNFP+ ++  G      G       SS SS T+LS ILSAKLRKCCKAPSPSLTCLRL
Sbjct: 67  AKTNFPIQRSSTGEPTPAAGRDARSNFSSGSSTTNLSQILSAKLRKCCKAPSPSLTCLRL 126

Query: 378 DTE 386
           D E
Sbjct: 127 DPE 129


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