BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037378
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]   145   4e-33
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]        113   2e-23

>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/103 (66%), Positives = 86/103 (83%)
 Frame = +1

Query: 1   VHLMAVEVGREIHSQTIRFGLDADVHVMTALIQMYSACGIILDARRLFDGMPTRDVVSWN 180
           V L+A+ VGR+IH Q I  GL +D+HV+TALIQMYS+CG + +AR+LFDG+  RDV  WN
Sbjct: 150 VRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWN 209

Query: 181 AMLAGYSKVGDLESARILFEKMSERNVISWTTVIAGYAQMNHP 309
           AM+AGY+KVGD+++AR LFE+M ERNVISWT VIAGYAQM+ P
Sbjct: 210 AMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRP 252


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/103 (66%), Positives = 86/103 (83%)
 Frame = +1

Query: 1   VHLMAVEVGREIHSQTIRFGLDADVHVMTALIQMYSACGIILDARRLFDGMPTRDVVSWN 180
           V L+A+ VGR+IH Q I  GL +D+HV+TALIQMYS+CG + +AR+LFDG+  RDV  WN
Sbjct: 150 VRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWN 209

Query: 181 AMLAGYSKVGDLESARILFEKMSERNVISWTTVIAGYAQMNHP 309
           AM+AGY+KVGD+++AR LFE+M ERNVISWT VIAGYAQM+ P
Sbjct: 210 AMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRP 252


>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
           gi|449493602|ref|XP_004159370.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 548

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/103 (64%), Positives = 83/103 (80%)
 Frame = +1

Query: 1   VHLMAVEVGREIHSQTIRFGLDADVHVMTALIQMYSACGIILDARRLFDGMPTRDVVSWN 180
           V L AVEVGR+IH+QT+   LD DV+V T+LIQMYS+CG + DAR+LFD +  +DV  WN
Sbjct: 133 VKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWN 192

Query: 181 AMLAGYSKVGDLESARILFEKMSERNVISWTTVIAGYAQMNHP 309
           AM+AGY KVG+L+SAR +F +M +RNVISWTT+IAGYAQ N P
Sbjct: 193 AMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRP 235


>ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|222841407|gb|EEE78954.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/103 (60%), Positives = 80/103 (77%), Gaps = 4/103 (3%)
 Frame = +1

Query: 13  AVEVGREIHSQTIRFGLDADVHVMTALIQMYSA--CGIILDARRLFDGMP--TRDVVSWN 180
           +++ GR++HSQ+IRFGL +D+HV+TA +QMYS+   G I DAR++FDGM   T DV  WN
Sbjct: 93  SIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSGCICDARKMFDGMSMSTGDVALWN 152

Query: 181 AMLAGYSKVGDLESARILFEKMSERNVISWTTVIAGYAQMNHP 309
           AML GY+K GDL +AR LFE+M +RNVISWT +I GYAQ N P
Sbjct: 153 AMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRP 195


>gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
          Length = 505

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
 Frame = +1

Query: 4   HLMAVEVGREIHSQTIRFG-LDADVHVMTALIQMYSACGIILDARRLFDGMPTRDVVSWN 180
           HL+   +  ++HS  +R G + +D HV ++L+Q+Y  CG + DAR +FD M  RDVV+WN
Sbjct: 89  HLLRRSLLGQLHSLLLRTGHVASDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWN 148

Query: 181 AMLAGYSKVGDLESARILFEKMSERNVISWTTVIAGYAQMNHP 309
            M+AGY K GD   AR LF+ M ERNV+SWTTVI GYAQM  P
Sbjct: 149 VMIAGYVKAGDQAHARELFDAMPERNVVSWTTVIGGYAQMKRP 191



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/85 (34%), Positives = 49/85 (57%)
 Frame = +1

Query: 7   LMAVEVGREIHSQTIRFGLDADVHVMTALIQMYSACGIILDARRLFDGMPTRDVVSWNAM 186
           L AV++G  +H   +R GL  ++ +M ++I MY  CG I  A  +F+GM  + VV+W  +
Sbjct: 223 LGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTL 282

Query: 187 LAGYSKVGDLESARILFEKMSERNV 261
           +AG++  G    A  +F +M   N+
Sbjct: 283 IAGFALHGLGLQAVEMFCRMERENM 307