BLASTX nr result

ID: Coptis23_contig00037372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037372
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302337.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51
ref|XP_004148419.1| PREDICTED: universal stress protein A-like p...   202   2e-50
ref|XP_002514027.1| conserved hypothetical protein [Ricinus comm...   201   6e-50
gb|AAB60745.1| ESTs gb|ATTS1236,gb|T43334,gb|N97019,gb|AA395203 ...   199   2e-49
gb|AAD46412.1|AF096262_1 ER6 protein [Solanum lycopersicum]           199   3e-49

>ref|XP_002302337.1| predicted protein [Populus trichocarpa] gi|222844063|gb|EEE81610.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  204 bits (520), Expect = 5e-51
 Identities = 109/157 (69%), Positives = 123/157 (78%), Gaps = 1/157 (0%)
 Frame = -1

Query: 469 MTEKLKCVVVAVNSSEESMNALKWALHNLKLHSSDSDEGE-PSSLVILHVQPSPSIFAGV 293
           M+  L CV+VAV+ SEESMNAL+ AL NLKL S   D  E P S VILHVQP PSI AG+
Sbjct: 1   MSANLGCVIVAVDGSEESMNALRHALDNLKLRSPAPDSTETPGSFVILHVQPPPSIAAGL 60

Query: 292 SPAPIPFIGPSDPEVPAFAAAIEAHQKRISEAIIAHALEICSEEKSQMNVKTQVVVGDPK 113
           +P  IPF GPS  EVPAF AAIEAHQ+RI+EAI+ HALEIC E+K  +NVKTQVV+GDPK
Sbjct: 61  NPGAIPFGGPSGLEVPAFTAAIEAHQRRITEAILEHALEICREKK--VNVKTQVVIGDPK 118

Query: 112 EVICEVVDKLNADLLVMGSHSYGPILRMFLGSVSNYC 2
           E ICEV + L ADLLVMG  S+GPI RMFLGSVSNYC
Sbjct: 119 EKICEVAENLPADLLVMGCRSFGPIKRMFLGSVSNYC 155


>ref|XP_004148419.1| PREDICTED: universal stress protein A-like protein-like [Cucumis
           sativus] gi|449518061|ref|XP_004166062.1| PREDICTED:
           universal stress protein A-like protein-like [Cucumis
           sativus]
          Length = 175

 Score =  202 bits (515), Expect = 2e-50
 Identities = 103/156 (66%), Positives = 125/156 (80%)
 Frame = -1

Query: 469 MTEKLKCVVVAVNSSEESMNALKWALHNLKLHSSDSDEGEPSSLVILHVQPSPSIFAGVS 290
           M+  L+CV+VAV+ S+ESM AL+WAL NLKLHSS  D  +  + V LHVQP PSI AG+S
Sbjct: 1   MSSDLRCVIVAVDGSDESMGALRWALQNLKLHSSSPDSTD-GTFVALHVQPPPSIAAGLS 59

Query: 289 PAPIPFIGPSDPEVPAFAAAIEAHQKRISEAIIAHALEICSEEKSQMNVKTQVVVGDPKE 110
           P PIPF GPSD EVPAF AAIE+HQ+RI+ AI+ HA +ICSE   Q+ V+T+VV+GDPKE
Sbjct: 60  PDPIPFGGPSDLEVPAFTAAIESHQRRITAAILEHASKICSE--YQVKVETKVVIGDPKE 117

Query: 109 VICEVVDKLNADLLVMGSHSYGPILRMFLGSVSNYC 2
            ICEV + L+ADLLVMGS ++GPI RMFLGSVSNYC
Sbjct: 118 KICEVAEHLHADLLVMGSRAFGPIKRMFLGSVSNYC 153


>ref|XP_002514027.1| conserved hypothetical protein [Ricinus communis]
           gi|223547113|gb|EEF48610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score =  201 bits (511), Expect = 6e-50
 Identities = 101/158 (63%), Positives = 122/158 (77%), Gaps = 2/158 (1%)
 Frame = -1

Query: 469 MTEKLKCVVVAVNSSEESMNALKWALHNLKLHSS--DSDEGEPSSLVILHVQPSPSIFAG 296
           MT  L  V+VAV+ SEESM AL+WA+ NLKL S   DS E  P S  ILHVQ  P+I  G
Sbjct: 1   MTANLGLVIVAVDGSEESMYALRWAIENLKLRSPAPDSTETPPGSFFILHVQSPPTIATG 60

Query: 295 VSPAPIPFIGPSDPEVPAFAAAIEAHQKRISEAIIAHALEICSEEKSQMNVKTQVVVGDP 116
           ++P  IPF GPSD EVPAF AAIEAHQ+RI+EA++ HAL+IC ++  + NVKTQVV+GDP
Sbjct: 61  LNPGAIPFGGPSDLEVPAFTAAIEAHQRRITEAVLEHALDICRQKNVEANVKTQVVIGDP 120

Query: 115 KEVICEVVDKLNADLLVMGSHSYGPILRMFLGSVSNYC 2
           KE ICEV +K++ADLLVMG  ++GPI RMFLGSVSNYC
Sbjct: 121 KEKICEVAEKMHADLLVMGCRAFGPIKRMFLGSVSNYC 158


>gb|AAB60745.1| ESTs gb|ATTS1236,gb|T43334,gb|N97019,gb|AA395203 come from this
           gene [Arabidopsis thaliana]
          Length = 174

 Score =  199 bits (507), Expect = 2e-49
 Identities = 105/153 (68%), Positives = 121/153 (79%), Gaps = 1/153 (0%)
 Frame = -1

Query: 457 LKCVVVAVNSSEESMNALKWALHNLKLHSSDSDEGEPSSLVILHVQPSPSIFAGVSPAPI 278
           L CVVVAV+ SE SM AL+WAL NLKL SS SD    SS V+LHVQPSPS+ AGVSP  I
Sbjct: 7   LNCVVVAVDGSEVSMEALRWALDNLKLSSSSSD----SSFVVLHVQPSPSVAAGVSPGTI 62

Query: 277 PFIGPSDPEVPAFAAAIEAHQKRISEAIIAHALEICSEEK-SQMNVKTQVVVGDPKEVIC 101
           PF GPS  EVPAF AAIE HQKRI++ I+ HA +IC+E+  S++NVKTQVV+GDPK  IC
Sbjct: 63  PFGGPSGLEVPAFTAAIEQHQKRITDTILEHASQICAEKSVSRVNVKTQVVIGDPKYKIC 122

Query: 100 EVVDKLNADLLVMGSHSYGPILRMFLGSVSNYC 2
           E V+ L+ADLLVMGS +YG I RMFLGSVSNYC
Sbjct: 123 EAVENLHADLLVMGSRAYGRIKRMFLGSVSNYC 155


>gb|AAD46412.1|AF096262_1 ER6 protein [Solanum lycopersicum]
          Length = 168

 Score =  199 bits (505), Expect = 3e-49
 Identities = 101/154 (65%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
 Frame = -1

Query: 460 KLKCVVVAVNSSEESMNALKWALHNLKLHSSDSDEGEPSS-LVILHVQPSPSIFAGVSPA 284
           +L CV+V+V+ SEESMNAL W L N+KL   D D  E    +VILHVQ  PSI AG++P 
Sbjct: 2   RLNCVIVSVDGSEESMNALNWTLDNIKLKPHDPDSPESQGFIVILHVQSPPSIAAGLNPG 61

Query: 283 PIPFIGPSDPEVPAFAAAIEAHQKRISEAIIAHALEICSEEKSQMNVKTQVVVGDPKEVI 104
            IPF GPSD EVPAF AAIEAHQKRI++AI+ HAL IC+  K   NVKTQVV+GDPKE I
Sbjct: 62  AIPFGGPSDVEVPAFTAAIEAHQKRITQAILDHALGICA--KKNANVKTQVVIGDPKEKI 119

Query: 103 CEVVDKLNADLLVMGSHSYGPILRMFLGSVSNYC 2
           C+ V+++NADLLVMGS ++GPI RMFLGSVSNYC
Sbjct: 120 CDAVEEMNADLLVMGSRAFGPIKRMFLGSVSNYC 153


Top