BLASTX nr result

ID: Coptis23_contig00037360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037360
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77047.1| hypothetical protein VITISV_035258 [Vitis vinifera]    80   3e-13
ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    77   3e-12
ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221...    76   6e-12
ref|XP_002334157.1| predicted protein [Populus trichocarpa] gi|2...    76   6e-12
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni...    76   6e-12

>emb|CAN77047.1| hypothetical protein VITISV_035258 [Vitis vinifera]
          Length = 384

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
 Frame = -1

Query: 695 IWWTKFLQQHLHQNLGQVTTSERMKEALLTKFVPMNYAQQLYGKLQDLKQESKSVQEYTE 516
           +WWT          L  ++T + MK  L  K++P NY  +L  +L +L+Q + SV EY +
Sbjct: 150 VWWTGVEGDIRRMGLPPISTWQEMKAKLREKYMPTNYYDKLCDQLINLRQNNMSVAEYMQ 209

Query: 515 SFYRLQSRCNLLESEEVRIRRYLHGLRGDIRYDLVYVRINTLEEAYSFAXXXXXXXXXXX 336
           +F  L++R  ++E  +  + R+  G R +I+ +L++  + +LE A+  A           
Sbjct: 210 TFDELKTRSQIVEDPQQTLARFKVGFRPEIQRELLHQPLYSLEHAFQVALDMEEYMGHSF 269

Query: 335 XXXXXKAT-------------------PIGPK-RIVKCYSCGQEGHVRVNCPKKPVLTID 216
                  T                     GPK + +KC+ C Q  H+  NCPK   + ++
Sbjct: 270 HRKPGAXTMESAQKKLHDTRFKSSSSQVAGPKGKGIKCFKCQQPSHMAYNCPKNLHIGLE 329

Query: 215 METSQLETKEEAQGYTTE-GILTPAD 141
            E      K+E    + + G+  PAD
Sbjct: 330 HEEELKPQKDEQNENSFDYGVYDPAD 355


>ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101214124 [Cucumis sativus]
          Length = 586

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
 Frame = -1

Query: 692 WWTKFLQQHLHQNLGQVTTSERMKEALLTKFVPMNYAQQLYGKLQDLKQESKSVQEYTES 513
           WW +            + +  +M   +  +F+P+NY Q LY + Q   Q S+S+ +YTE 
Sbjct: 144 WWDQLQNNRRLFGKQSIRSWPKMLRLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEE 203

Query: 512 FYRLQSRCNLLESEEVRIRRYLHGLRGDIRYDLVYVR-INTLEEAYSFA 369
           FYRL +R NLLE+E  +I R++HGLR +I+ D+V++  +  L +A S A
Sbjct: 204 FYRLGARNNLLETEHQQISRFIHGLRDEIK-DIVHLHPLTFLSDAISLA 251


>ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
          Length = 1544

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 41/111 (36%), Positives = 62/111 (55%)
 Frame = -1

Query: 701 ALIWWTKFLQQHLHQNLGQVTTSERMKEALLTKFVPMNYAQQLYGKLQDLKQESKSVQEY 522
           A  WW +            V + E+MK+ L  +F+P NY Q LY + Q+ +Q  ++V EY
Sbjct: 291 ASAWWDQLEINRQRCGKQPVRSWEKMKKLLKARFLPPNYEQTLYNQYQNCRQGVRTVAEY 350

Query: 521 TESFYRLQSRCNLLESEEVRIRRYLHGLRGDIRYDLVYVRINTLEEAYSFA 369
            E F+RL +R NL E+E+ ++ R++ GLR DI+  +       L EA SFA
Sbjct: 351 IEEFHRLSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPFRFLSEAISFA 401


>ref|XP_002334157.1| predicted protein [Populus trichocarpa] gi|222869685|gb|EEF06816.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 37/111 (33%), Positives = 63/111 (56%)
 Frame = -1

Query: 701 ALIWWTKFLQQHLHQNLGQVTTSERMKEALLTKFVPMNYAQQLYGKLQDLKQESKSVQEY 522
           A  WW    +Q        ++  E MKE L  K++P++Y Q ++ ++  L+Q S SV ++
Sbjct: 50  ARAWWGSVEEQLRRTRRPTISNWEEMKERLKEKYLPIDYEQMMFEEMLQLRQGSLSVDQF 109

Query: 521 TESFYRLQSRCNLLESEEVRIRRYLHGLRGDIRYDLVYVRINTLEEAYSFA 369
           T+ F+ L  R  ++E+E+  + RY  GLR D+R ++   R+  +EEAY  A
Sbjct: 110 TDCFHELTVRSKVVETEQQTLARYRTGLRNDLRKEMWTARLINVEEAYQLA 160


>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1234

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
 Frame = -1

Query: 701 ALIWWTKFLQQHLHQNLGQVTTSERMKEALLTKFVPMNYAQQLYGKLQDLKQESKSVQEY 522
           A +WW +  +++ + N+ Q  T + +K  +  +FVP  YA+ L  +LQ L+Q +KSV+EY
Sbjct: 202 ASVWWIEHGKKNPN-NMPQ--TWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEY 258

Query: 521 TESFYRLQSRCNLLESEEVRIRRYLHGLRGDIRYDLV-YVRINTLEEAYSFAXXXXXXXX 345
            +       RCNL E+E+  + R+L GL  +I YD+V Y     +   +  A        
Sbjct: 259 YQELQMGLLRCNLEETEDAAMARFLGGLNREI-YDIVDYKDYTNMTRLFHLACKAEREVQ 317

Query: 344 XXXXXXXXKATPIGPKRIVKCYSCGQEGHVRVNCPKKPVLTI 219
                     +  G  R V+C+ C   GHV+ +CP K VL +
Sbjct: 318 GRRASAKANFS-AGRMRDVQCHRCKGFGHVQRDCPSKRVLVV 358


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