BLASTX nr result
ID: Coptis23_contig00037354
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00037354 (259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520828.1| pentatricopeptide repeat-containing protein,... 122 4e-26 ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24 emb|CBI16742.3| unnamed protein product [Vitis vinifera] 112 3e-23 emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera] 112 3e-23 ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group] g... 111 5e-23 >ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 656 Score = 122 bits (305), Expect = 4e-26 Identities = 55/86 (63%), Positives = 70/86 (81%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 + AR+VF+ M ERNVF+WT L+SGY +IGNV EA LF +MPE+NVVSWTT ++G+A+NG Sbjct: 130 DKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWTTAVVGYAQNG 189 Query: 182 LIGEALKFFNQMPQKNVVAWTIMVKS 259 I EA FNQMP+KN++AWT MVKS Sbjct: 190 FIDEARDIFNQMPEKNIIAWTAMVKS 215 Score = 89.0 bits (219), Expect = 4e-16 Identities = 37/84 (44%), Positives = 58/84 (69%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 ++A R+FN M E+NV +WT + GY + G + EAR +F +MPE+N+++WT M+ + N Sbjct: 161 DEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVEND 220 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 I EA + F QMPQ+N+ +W IM+ Sbjct: 221 EIDEAFELFYQMPQRNLYSWNIMI 244 Score = 85.5 bits (210), Expect = 4e-15 Identities = 36/84 (42%), Positives = 54/84 (64%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 ++AR +FN M E+N+ WT ++ Y+ + EA LFY+MP+RN+ SW MI G Sbjct: 192 DEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIMISGCINAN 251 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 + EA++ FN MPQ+N V+WT +V Sbjct: 252 RLNEAIQLFNSMPQRNEVSWTTLV 275 Score = 84.0 bits (206), Expect = 1e-14 Identities = 39/82 (47%), Positives = 58/82 (70%) Frame = +2 Query: 8 ARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGLI 187 A +F + ERNV + +ISGY+R G + +AR +F +M ERNV SWT+++ G+ + G + Sbjct: 101 AEILFREIPERNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNV 160 Query: 188 GEALKFFNQMPQKNVVAWTIMV 253 EA++ FNQMP+KNVV+WT V Sbjct: 161 DEAMRLFNQMPEKNVVSWTTAV 182 Score = 83.6 bits (205), Expect = 2e-14 Identities = 36/84 (42%), Positives = 56/84 (66%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 ++A +F M +RN+++W +ISG + + EA LF MP+RN VSWTT++ G ARNG Sbjct: 223 DEAFELFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLARNG 282 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 ++ A K+F+ MP K++ AW M+ Sbjct: 283 MMELARKYFDHMPTKDIAAWNAMI 306 Score = 72.8 bits (177), Expect = 3e-11 Identities = 31/83 (37%), Positives = 50/83 (60%) Frame = +2 Query: 5 DARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGL 184 +A ++FN M +RN +WT L++G R G + AR F MP +++ +W MI + G Sbjct: 255 EAIQLFNSMPQRNEVSWTTLVTGLARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQGS 314 Query: 185 IGEALKFFNQMPQKNVVAWTIMV 253 + EA FN MP+KN+V+W ++ Sbjct: 315 MAEASNLFNLMPEKNIVSWNALI 337 Score = 61.2 bits (147), Expect = 8e-08 Identities = 29/76 (38%), Positives = 47/76 (61%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 E AR+ F+ M +++ W +I+ Y+ G++ EA LF MPE+N+VSW +I G+ARNG Sbjct: 285 ELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNG 344 Query: 182 LIGEALKFFNQMPQKN 229 +L++ M + N Sbjct: 345 PESNSLRYLILMLRSN 360 >ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09410-like [Glycine max] Length = 669 Score = 117 bits (293), Expect = 1e-24 Identities = 53/86 (61%), Positives = 68/86 (79%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 +DAR+VF+ MT+RN F+WT LISGY G + EA LF +MPERNVVSWT ++LGFARNG Sbjct: 144 DDARKVFDNMTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPERNVVSWTMVVLGFARNG 203 Query: 182 LIGEALKFFNQMPQKNVVAWTIMVKS 259 L+ A +FF MP+KN++AWT MVK+ Sbjct: 204 LMDHAGRFFYLMPEKNIIAWTAMVKA 229 Score = 85.5 bits (210), Expect = 4e-15 Identities = 42/83 (50%), Positives = 56/83 (67%) Frame = +2 Query: 5 DARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGL 184 +A ++F M ERNV +W +ISG LR V EA LF MP+RN VSWT M+ G A+N + Sbjct: 238 EAYKLFLEMPERNVRSWNIMISGCLRANRVDEAIGLFESMPDRNHVSWTAMVSGLAQNKM 297 Query: 185 IGEALKFFNQMPQKNVVAWTIMV 253 IG A K+F+ MP K++ AWT M+ Sbjct: 298 IGIARKYFDLMPYKDMAAWTAMI 320 Score = 80.5 bits (197), Expect = 1e-13 Identities = 37/83 (44%), Positives = 56/83 (67%) Frame = +2 Query: 5 DARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGL 184 +A VF M +RNV + +I GY ++G + +AR +F M +RN SWT++I G+ G Sbjct: 114 EAETVFKEMPQRNVVAESAMIDGYAKVGRLDDARKVFDNMTQRNAFSWTSLISGYFSCGK 173 Query: 185 IGEALKFFNQMPQKNVVAWTIMV 253 I EAL F+QMP++NVV+WT++V Sbjct: 174 IEEALHLFDQMPERNVVSWTMVV 196 Score = 75.5 bits (184), Expect = 4e-12 Identities = 38/84 (45%), Positives = 47/84 (55%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 + A R F M E+N+ WT ++ YL G EA LF MPERNV SW MI G R Sbjct: 206 DHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPERNVRSWNIMISGCLRAN 265 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 + EA+ F MP +N V+WT MV Sbjct: 266 RVDEAIGLFESMPDRNHVSWTAMV 289 Score = 66.6 bits (161), Expect = 2e-09 Identities = 30/84 (35%), Positives = 57/84 (67%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 ++AR++F+ M +R+ ++ +I+ YL+ ++ EA +F MP+RNVV+ + MI G+A+ G Sbjct: 82 DEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMPQRNVVAESAMIDGYAKVG 141 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 + +A K F+ M Q+N +WT ++ Sbjct: 142 RLDDARKVFDNMTQRNAFSWTSLI 165 Score = 63.2 bits (152), Expect = 2e-08 Identities = 31/67 (46%), Positives = 45/67 (67%) Frame = +2 Query: 8 ARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGLI 187 AR+ F+ M +++ WT +I+ + G + EAR LF ++PE+NV SW TMI G+ARN + Sbjct: 301 ARKYFDLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYV 360 Query: 188 GEALKFF 208 GEAL F Sbjct: 361 GEALNLF 367 >emb|CBI16742.3| unnamed protein product [Vitis vinifera] Length = 674 Score = 112 bits (280), Expect = 3e-23 Identities = 51/86 (59%), Positives = 67/86 (77%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 + A++VF+ M + NVF+WT LISGY R G V +A LF +MP +NVVSWTTM+LG+ARNG Sbjct: 148 DSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNG 207 Query: 182 LIGEALKFFNQMPQKNVVAWTIMVKS 259 LI +A FNQMP+KN ++WT M+KS Sbjct: 208 LIDQARSVFNQMPEKNTISWTAMMKS 233 Score = 84.0 bits (206), Expect = 1e-14 Identities = 39/84 (46%), Positives = 52/84 (61%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 + AR VFN M E+N +WT ++ Y+ G EA LF+ MP+RN+ SW TMI G Sbjct: 210 DQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGK 269 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 + EA K F+ MP +N V+WTIMV Sbjct: 270 RVNEAFKLFHLMPLRNAVSWTIMV 293 Score = 83.2 bits (204), Expect = 2e-14 Identities = 35/82 (42%), Positives = 56/82 (68%) Frame = +2 Query: 8 ARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGLI 187 A ++F+ M +NV +WT ++ GY R G + +AR +F +MPE+N +SWT M+ + NG Sbjct: 181 ACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRT 240 Query: 188 GEALKFFNQMPQKNVVAWTIMV 253 EALK F++MPQ+N+ +W M+ Sbjct: 241 DEALKLFHEMPQRNLYSWNTMI 262 Score = 82.4 bits (202), Expect = 4e-14 Identities = 38/84 (45%), Positives = 56/84 (66%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 ++A ++F+ M +RN+++W +ISG L V EA LF+ MP RN VSWT M+ G ARNG Sbjct: 241 DEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNG 300 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 A ++F+QMP K++ AW M+ Sbjct: 301 FTKLAREYFDQMPNKDIAAWNAMI 324 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/82 (40%), Positives = 53/82 (64%) Frame = +2 Query: 8 ARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGLI 187 A ++F M +R + + +I GY + G + A+ +F M + NV SWT++I G+ R+G + Sbjct: 119 AEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQV 178 Query: 188 GEALKFFNQMPQKNVVAWTIMV 253 +A + F+QMP KNVV+WT MV Sbjct: 179 AKACQLFDQMPAKNVVSWTTMV 200 Score = 64.7 bits (156), Expect = 8e-09 Identities = 30/83 (36%), Positives = 48/83 (57%) Frame = +2 Query: 5 DARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGL 184 +A ++F+ M RN +WT ++SG R G AR F +MP +++ +W MI + L Sbjct: 273 EAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECL 332 Query: 185 IGEALKFFNQMPQKNVVAWTIMV 253 I EA + FN M ++N+V W M+ Sbjct: 333 IVEASELFNLMTERNIVTWNAMI 355 >emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera] Length = 932 Score = 112 bits (280), Expect = 3e-23 Identities = 51/86 (59%), Positives = 67/86 (77%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 + A++VF+ M + NVF+WT LISGY R G V +A LF +MP +NVVSWTTM+LG+ARNG Sbjct: 54 DSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNG 113 Query: 182 LIGEALKFFNQMPQKNVVAWTIMVKS 259 LI +A FNQMP+KN ++WT M+KS Sbjct: 114 LIDQARSVFNQMPEKNTISWTAMMKS 139 Score = 84.0 bits (206), Expect = 1e-14 Identities = 39/84 (46%), Positives = 52/84 (61%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 + AR VFN M E+N +WT ++ Y+ G EA LF+ MP+RN+ SW TMI G Sbjct: 116 DQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGK 175 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 + EA K F+ MP +N V+WTIMV Sbjct: 176 RVNEAFKLFHLMPLRNAVSWTIMV 199 Score = 83.2 bits (204), Expect = 2e-14 Identities = 35/82 (42%), Positives = 56/82 (68%) Frame = +2 Query: 8 ARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGLI 187 A ++F+ M +NV +WT ++ GY R G + +AR +F +MPE+N +SWT M+ + NG Sbjct: 87 ACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRT 146 Query: 188 GEALKFFNQMPQKNVVAWTIMV 253 EALK F++MPQ+N+ +W M+ Sbjct: 147 DEALKLFHEMPQRNLYSWNTMI 168 Score = 82.4 bits (202), Expect = 4e-14 Identities = 38/84 (45%), Positives = 56/84 (66%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 ++A ++F+ M +RN+++W +ISG L V EA LF+ MP RN VSWT M+ G ARNG Sbjct: 147 DEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNG 206 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 A ++F+QMP K++ AW M+ Sbjct: 207 FTKLAREYFDQMPNKDIAAWNAMI 230 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/82 (40%), Positives = 53/82 (64%) Frame = +2 Query: 8 ARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGLI 187 A ++F M +R + + +I GY + G + A+ +F M + NV SWT++I G+ R+G + Sbjct: 25 AEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQV 84 Query: 188 GEALKFFNQMPQKNVVAWTIMV 253 +A + F+QMP KNVV+WT MV Sbjct: 85 AKACQLFDQMPAKNVVSWTTMV 106 Score = 64.7 bits (156), Expect = 8e-09 Identities = 30/83 (36%), Positives = 48/83 (57%) Frame = +2 Query: 5 DARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGL 184 +A ++F+ M RN +WT ++SG R G AR F +MP +++ +W MI + L Sbjct: 179 EAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECL 238 Query: 185 IGEALKFFNQMPQKNVVAWTIMV 253 I EA + FN M ++N+V W M+ Sbjct: 239 IVEASELFNLMTERNIVTWNAMI 261 >ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group] gi|45680436|gb|AAS75237.1| unknown protein [Oryza sativa Japonica Group] gi|113578003|dbj|BAF16366.1| Os05g0112900 [Oryza sativa Japonica Group] gi|215715346|dbj|BAG95097.1| unnamed protein product [Oryza sativa Japonica Group] gi|215736909|dbj|BAG95838.1| unnamed protein product [Oryza sativa Japonica Group] gi|222629956|gb|EEE62088.1| hypothetical protein OsJ_16872 [Oryza sativa Japonica Group] Length = 661 Score = 111 bits (278), Expect = 5e-23 Identities = 50/84 (59%), Positives = 66/84 (78%) Frame = +2 Query: 8 ARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGLI 187 ARR+F+GM +NV WTC++SGY R G V EAR LF MP RNV SWTTM+ G+A NG++ Sbjct: 142 ARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTMVQGYAHNGML 201 Query: 188 GEALKFFNQMPQKNVVAWTIMVKS 259 EA + F++MP++NVVAWT+MVK+ Sbjct: 202 REAREMFDKMPERNVVAWTVMVKA 225 Score = 93.6 bits (231), Expect = 2e-17 Identities = 42/83 (50%), Positives = 58/83 (69%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 ++ARR+F+ M RNVF+WT ++ GY G + EAR +F +MPERNVV+WT M+ + NG Sbjct: 171 DEARRLFDLMPYRNVFSWTTMVQGYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDNG 230 Query: 182 LIGEALKFFNQMPQKNVVAWTIM 250 I EAL+ FN+MPQ N +W M Sbjct: 231 CIQEALELFNRMPQMNSYSWNAM 253 Score = 82.8 bits (203), Expect = 3e-14 Identities = 34/84 (40%), Positives = 56/84 (66%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 ++A +FN M + N ++W + +G + G V +A LF +MP +NVVSWT M+ G A+NG Sbjct: 233 QEALELFNRMPQMNSYSWNAMATGLMSAGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQNG 292 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 + A +FF++MP+K++ AW M+ Sbjct: 293 FVSRAREFFDRMPKKDIPAWNSMI 316 Score = 73.9 bits (180), Expect = 1e-11 Identities = 30/84 (35%), Positives = 55/84 (65%) Frame = +2 Query: 2 EDARRVFNGMTERNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNG 181 +DA ++F+ M +NV +WT +++G + G V AR F RMP++++ +W +MI + +G Sbjct: 264 DDAVQLFDKMPHKNVVSWTIMVTGLAQNGFVSRAREFFDRMPKKDIPAWNSMITAYTNDG 323 Query: 182 LIGEALKFFNQMPQKNVVAWTIMV 253 + +A + F+ MP KN+V W I++ Sbjct: 324 QVNDAQRLFDIMPSKNLVTWNIII 347 Score = 69.7 bits (169), Expect = 2e-10 Identities = 32/73 (43%), Positives = 47/73 (64%) Frame = +2 Query: 38 RNVFTWTCLISGYLRIGNVYEARWLFYRMPERNVVSWTTMILGFARNGLIGEALKFFNQM 217 R + T ++ GY++ G V AR LF M +NVV+WT M+ G+ R GL+ EA + F+ M Sbjct: 121 RGIHLDTVMLDGYVKAGQVDRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLM 180 Query: 218 PQKNVVAWTIMVK 256 P +NV +WT MV+ Sbjct: 181 PYRNVFSWTTMVQ 193