BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037350
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07

>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
           protein product [Vitis vinifera]
          Length = 618

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = +3

Query: 3   KTPGCSWVEVENQVHEFHAGDGFHQISRKLDGVINLLKEDMKMKVFIPLTDF 158
           KTPGCSW+E+ENQVHEFHAGD  H IS+ +  VINLL E+MK++ + P  DF
Sbjct: 566 KTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMKVEGYGPKVDF 617


>ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 608

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 3   KTPGCSWVEVENQVHEFHAGDGFHQISRKLDGVINLLKEDMKMKVFIP 146
           KTPGCSW+EVEN +HEFHAGDG    S  L  +I+LL E++K + ++P
Sbjct: 557 KTPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVP 604


>ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 3   KTPGCSWVEVENQVHEFHAGDGFHQISRKLDGVINLLKEDMKMKVFIP 146
           KTPGCSW+EVEN +HEFHAGDG    S  L  +I+LL E++K + ++P
Sbjct: 563 KTPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVP 610


>ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 22/48 (45%), Positives = 37/48 (77%)
 Frame = +3

Query: 3   KTPGCSWVEVENQVHEFHAGDGFHQISRKLDGVINLLKEDMKMKVFIP 146
           KTPGCSW+++ +Q+HEFHAGD  HQ   ++  +++LL +D++ + +IP
Sbjct: 567 KTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIP 614


>ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 22/48 (45%), Positives = 37/48 (77%)
 Frame = +3

Query: 3   KTPGCSWVEVENQVHEFHAGDGFHQISRKLDGVINLLKEDMKMKVFIP 146
           KTPGCSW+++ +Q+HEFHAGD  HQ   ++  +++LL +D++ + +IP
Sbjct: 567 KTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIP 614