BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037348
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|2...   246   2e-63
ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ric...   245   3e-63
ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   242   2e-62
ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Gl...   238   4e-61
ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis v...   238   4e-61

>ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|222842578|gb|EEE80125.1|
           predicted protein [Populus trichocarpa]
          Length = 758

 Score =  246 bits (627), Expect = 2e-63
 Identities = 117/137 (85%), Positives = 129/137 (94%)
 Frame = +2

Query: 110 MKFQIEEITVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 289
           MKFQIE++TVYFPYDHIYPEQYSYM++LKRALDAKGHCLLEMPTGTGKTIALLSLITSY+
Sbjct: 1   MKFQIEDVTVYFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYT 60

Query: 290 LSKPQTPIKLLYCTRTVHEMEKTLAELRLLYTYQVKHLGESAQILAIGLSSRKNLCVNPN 469
           +SKPQ  IKL+YCTRTVHEMEKTLAEL+LL+ YQVKHLG +A+ILAIGLSSRKNLCVNPN
Sbjct: 61  ISKPQGAIKLIYCTRTVHEMEKTLAELKLLHNYQVKHLGPAAKILAIGLSSRKNLCVNPN 120

Query: 470 VVSGNTRDSVDAGCRKR 520
           V+  N RDSVDA CRKR
Sbjct: 121 VLEANNRDSVDAACRKR 137


>ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
           gi|223540142|gb|EEF41719.1| DNA repair helicase
           rad3/xp-d, putative [Ricinus communis]
          Length = 758

 Score =  245 bits (625), Expect = 3e-63
 Identities = 115/136 (84%), Positives = 130/136 (95%)
 Frame = +2

Query: 110 MKFQIEEITVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 289
           MKFQIE++TVYFPYD+IYPEQYSYM++LKRALDAKGHCLLEMPTGTGKTIALLSLITSYS
Sbjct: 1   MKFQIEDVTVYFPYDNIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 60

Query: 290 LSKPQTPIKLLYCTRTVHEMEKTLAELRLLYTYQVKHLGESAQILAIGLSSRKNLCVNPN 469
           LSKPQ+P+KL+YCTRTVHEMEKTLAEL+LL+ YQ+KHLG +A+ILAIGLSSRKNLCVNP 
Sbjct: 61  LSKPQSPVKLIYCTRTVHEMEKTLAELKLLHNYQIKHLGPAARILAIGLSSRKNLCVNPR 120

Query: 470 VVSGNTRDSVDAGCRK 517
           V++   RDSVDAGCRK
Sbjct: 121 VLAAENRDSVDAGCRK 136


>ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
           [Cucumis sativus]
          Length = 598

 Score =  242 bits (618), Expect = 2e-62
 Identities = 114/136 (83%), Positives = 128/136 (94%)
 Frame = +2

Query: 110 MKFQIEEITVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 289
           MKFQ+E++TVYFPYDHIYPEQY+YML+LKRALDAKGHCLLEMPTGTG TIALLSLITSY+
Sbjct: 1   MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGXTIALLSLITSYA 60

Query: 290 LSKPQTPIKLLYCTRTVHEMEKTLAELRLLYTYQVKHLGESAQILAIGLSSRKNLCVNPN 469
           LSKPQ P+KL+YCTRTVHEMEKTLAELRLL+ YQV+ LG  AQILA+GLSSRKNLCVNPN
Sbjct: 61  LSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPN 120

Query: 470 VVSGNTRDSVDAGCRK 517
           V++  +RDSVDAGCRK
Sbjct: 121 VLASESRDSVDAGCRK 136


>ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
          Length = 758

 Score =  238 bits (607), Expect = 4e-61
 Identities = 113/136 (83%), Positives = 128/136 (94%)
 Frame = +2

Query: 110 MKFQIEEITVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 289
           MKF+IE+ITVYFPYD+IYPEQYSYM++LKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MKFEIEDITVYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60

Query: 290 LSKPQTPIKLLYCTRTVHEMEKTLAELRLLYTYQVKHLGESAQILAIGLSSRKNLCVNPN 469
           LSKP +P+KLLYCTRTVHEMEKTLAELRLL+ YQ++HLG +A+ILA+GLSSRKNLCVNP 
Sbjct: 61  LSKPHSPLKLLYCTRTVHEMEKTLAELRLLHDYQLRHLGPAAKILALGLSSRKNLCVNPR 120

Query: 470 VVSGNTRDSVDAGCRK 517
           V++   RDSVDAGCRK
Sbjct: 121 VLAAENRDSVDAGCRK 136


>ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
          Length = 758

 Score =  238 bits (607), Expect = 4e-61
 Identities = 114/136 (83%), Positives = 127/136 (93%)
 Frame = +2

Query: 110 MKFQIEEITVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 289
           MKFQIE++TVYFPYD+IYPEQYSYM++LKRALDAKGH LLEMPTGTGKTIALLSLITSY+
Sbjct: 1   MKFQIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHALLEMPTGTGKTIALLSLITSYA 60

Query: 290 LSKPQTPIKLLYCTRTVHEMEKTLAELRLLYTYQVKHLGESAQILAIGLSSRKNLCVNPN 469
           LSKP  PIKLLYCTRTVHEMEKTLAELRLL+ YQ++HLG +A+ILA+GLSSRKNLC+NP 
Sbjct: 61  LSKPSNPIKLLYCTRTVHEMEKTLAELRLLHQYQLRHLGPAARILALGLSSRKNLCINPA 120

Query: 470 VVSGNTRDSVDAGCRK 517
           VVS   RDSVDAGCRK
Sbjct: 121 VVSAENRDSVDAGCRK 136