BLASTX nr result

ID: Coptis23_contig00037333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037333
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Viti...   263   8e-69
ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricin...   262   2e-68
emb|CBI26414.3| unnamed protein product [Vitis vinifera]              259   1e-67
ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   259   2e-67
ref|XP_002319231.1| predicted protein [Populus trichocarpa] gi|2...   251   6e-65

>ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
          Length = 953

 Score =  263 bits (673), Expect = 8e-69
 Identities = 126/161 (78%), Positives = 146/161 (90%)
 Frame = +3

Query: 3   VPMPLGFEALCLKACTHYPTLFDHFQRELRDVLNELQRNSVFEDWSKTQSWKLLKELAHS 182
           +PMPLG EA+CLKACTHYPTLFDHFQRELRDVL + QR S F+DW +TQSW+LLKELA+S
Sbjct: 163 IPMPLGHEAICLKACTHYPTLFDHFQRELRDVLQDHQRKSQFQDWRETQSWQLLKELANS 222

Query: 183 ASHRAVARKVPQMKPVHRGLGMELEKAKAIQSRIDDFVKHMSDLLRIERDAELEFTQEEL 362
           A HRA++RKV Q KP+   LGMEL+KAKAIQSRID+F K MS+LL+IERD+ELEFTQEEL
Sbjct: 223 AQHRAISRKVSQPKPLKGVLGMELDKAKAIQSRIDEFTKRMSELLQIERDSELEFTQEEL 282

Query: 363 NAVPMPDENSDTSKPIEYLVSHGQAQQELCDTICNLSAVSS 485
           NAVP PDE+SD+SKPIE+LVSHGQAQQELCDTICNL+AVS+
Sbjct: 283 NAVPTPDESSDSSKPIEFLVSHGQAQQELCDTICNLNAVST 323


>ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis]
           gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2,
           putative [Ricinus communis]
          Length = 989

 Score =  262 bits (670), Expect = 2e-68
 Identities = 127/162 (78%), Positives = 143/162 (88%)
 Frame = +3

Query: 3   VPMPLGFEALCLKACTHYPTLFDHFQRELRDVLNELQRNSVFEDWSKTQSWKLLKELAHS 182
           VP+PLGFEALCLKAC HYPTLFDHFQRELRDVL +LQR  + +DW  T+SWKLLKELA+S
Sbjct: 199 VPIPLGFEALCLKACIHYPTLFDHFQRELRDVLQDLQRKGLVQDWQNTESWKLLKELANS 258

Query: 183 ASHRAVARKVPQMKPVHRGLGMELEKAKAIQSRIDDFVKHMSDLLRIERDAELEFTQEEL 362
             HRAVARKV + KP+   LGM L+KAKAIQSRID+F K MS+LL+IERD+ELEFTQEEL
Sbjct: 259 VQHRAVARKVSKPKPLQGVLGMNLDKAKAIQSRIDEFTKTMSELLQIERDSELEFTQEEL 318

Query: 363 NAVPMPDENSDTSKPIEYLVSHGQAQQELCDTICNLSAVSSS 488
           NAVP PDENSD SKPIE+LVSHGQAQQELCDTICNL+AVS+S
Sbjct: 319 NAVPTPDENSDPSKPIEFLVSHGQAQQELCDTICNLNAVSTS 360


>emb|CBI26414.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  259 bits (663), Expect = 1e-67
 Identities = 125/159 (78%), Positives = 144/159 (90%)
 Frame = +3

Query: 9   MPLGFEALCLKACTHYPTLFDHFQRELRDVLNELQRNSVFEDWSKTQSWKLLKELAHSAS 188
           MPLG EA+CLKACTHYPTLFDHFQRELRDVL + QR S F+DW +TQSW+LLKELA+SA 
Sbjct: 1   MPLGHEAICLKACTHYPTLFDHFQRELRDVLQDHQRKSQFQDWRETQSWQLLKELANSAQ 60

Query: 189 HRAVARKVPQMKPVHRGLGMELEKAKAIQSRIDDFVKHMSDLLRIERDAELEFTQEELNA 368
           HRA++RKV Q KP+   LGMEL+KAKAIQSRID+F K MS+LL+IERD+ELEFTQEELNA
Sbjct: 61  HRAISRKVSQPKPLKGVLGMELDKAKAIQSRIDEFTKRMSELLQIERDSELEFTQEELNA 120

Query: 369 VPMPDENSDTSKPIEYLVSHGQAQQELCDTICNLSAVSS 485
           VP PDE+SD+SKPIE+LVSHGQAQQELCDTICNL+AVS+
Sbjct: 121 VPTPDESSDSSKPIEFLVSHGQAQQELCDTICNLNAVST 159


>ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
           gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding
           protein SMUBP-2-like [Cucumis sativus]
          Length = 957

 Score =  259 bits (661), Expect = 2e-67
 Identities = 124/162 (76%), Positives = 143/162 (88%)
 Frame = +3

Query: 3   VPMPLGFEALCLKACTHYPTLFDHFQRELRDVLNELQRNSVFEDWSKTQSWKLLKELAHS 182
           VPMPLG EA+CLKA THYPTLFDHFQRELRDVL +LQR S+F DW +TQSWKLLK+LAHS
Sbjct: 167 VPMPLGLEAVCLKASTHYPTLFDHFQRELRDVLQDLQRQSLFLDWRETQSWKLLKKLAHS 226

Query: 183 ASHRAVARKVPQMKPVHRGLGMELEKAKAIQSRIDDFVKHMSDLLRIERDAELEFTQEEL 362
             H+A+ARK+ + K V   LGM+L+KAKAIQ+RID+F   MS+LLRIERD+ELEFTQEEL
Sbjct: 227 VQHKAIARKISEPKVVQGALGMDLKKAKAIQNRIDEFANRMSELLRIERDSELEFTQEEL 286

Query: 363 NAVPMPDENSDTSKPIEYLVSHGQAQQELCDTICNLSAVSSS 488
           NAVP PDE+SD SKPIE+LVSHGQAQQELCDTICNL+AVS+S
Sbjct: 287 NAVPTPDESSDNSKPIEFLVSHGQAQQELCDTICNLNAVSTS 328


>ref|XP_002319231.1| predicted protein [Populus trichocarpa] gi|222857607|gb|EEE95154.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score =  251 bits (640), Expect = 6e-65
 Identities = 121/160 (75%), Positives = 138/160 (86%)
 Frame = +3

Query: 9   MPLGFEALCLKACTHYPTLFDHFQRELRDVLNELQRNSVFEDWSKTQSWKLLKELAHSAS 188
           MPLG EA+CLKACTHYPTLFDHFQRELR+VL +L+R  + +DW KT+SWKLLKELA+SA 
Sbjct: 1   MPLGLEAICLKACTHYPTLFDHFQRELREVLQDLKRKGLVQDWQKTESWKLLKELANSAQ 60

Query: 189 HRAVARKVPQMKPVHRGLGMELEKAKAIQSRIDDFVKHMSDLLRIERDAELEFTQEELNA 368
           HRA+ARK  Q KP+   LGM LEKAKAIQ RI++F   MS+LLRIERDAELEFTQEELNA
Sbjct: 61  HRAIARKATQSKPLQGVLGMNLEKAKAIQGRINEFTNQMSELLRIERDAELEFTQEELNA 120

Query: 369 VPMPDENSDTSKPIEYLVSHGQAQQELCDTICNLSAVSSS 488
           VP  DE+SD+SKPIE+LVSHGQ QQELCDTICNL AVS+S
Sbjct: 121 VPTLDESSDSSKPIEFLVSHGQGQQELCDTICNLYAVSTS 160


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