BLASTX nr result

ID: Coptis23_contig00037329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037329
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like...   157   9e-37
ref|XP_002518591.1| transcription factor, putative [Ricinus comm...   154   9e-36
gb|ABK95256.1| unknown [Populus trichocarpa]                          153   2e-35
ref|XP_003528420.1| PREDICTED: transcription factor bHLH123-like...   152   3e-35
ref|XP_003532569.1| PREDICTED: transcription factor bHLH123-like...   145   4e-33

>ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
           gi|297735889|emb|CBI18658.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score =  157 bits (397), Expect = 9e-37
 Identities = 81/105 (77%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   CSNFPGEFNSAEVQDSCSLVKKTS-EPTFKRPRIETPSPLPTFKVRKEKLGDRITALQQL 179
           CS    + N+ EV+DS S++KK+S EP FKRPRIETPSPLPTFKVRKEKLGDRITALQQL
Sbjct: 311 CSKLTTKLNTEEVRDSGSVLKKSSAEPAFKRPRIETPSPLPTFKVRKEKLGDRITALQQL 370

Query: 180 VSPFGKTDTASVLFEAIEYIKFLHEKVGVLSSLYMKNGVPTQYQQ 314
           VSPFGKTDTASVL EAIEYIKFLH++V VLS+ YMKNG P Q QQ
Sbjct: 371 VSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNGAPIQPQQ 415


>ref|XP_002518591.1| transcription factor, putative [Ricinus communis]
           gi|223542436|gb|EEF43978.1| transcription factor,
           putative [Ricinus communis]
          Length = 494

 Score =  154 bits (388), Expect = 9e-36
 Identities = 79/104 (75%), Positives = 88/104 (84%)
 Frame = +3

Query: 3   CSNFPGEFNSAEVQDSCSLVKKTSEPTFKRPRIETPSPLPTFKVRKEKLGDRITALQQLV 182
           C N   + N+ +V+DS S+VKK SEP  KR RIETPSPLPTFKVRKEKLGDRITALQQLV
Sbjct: 343 CPNVTLKPNNEQVRDSGSVVKKGSEPAIKRARIETPSPLPTFKVRKEKLGDRITALQQLV 402

Query: 183 SPFGKTDTASVLFEAIEYIKFLHEKVGVLSSLYMKNGVPTQYQQ 314
           SPFGKTDTASVL EAIEYIKFLH++V VLS+ YMKNG P Q+QQ
Sbjct: 403 SPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNGNPIQHQQ 446


>gb|ABK95256.1| unknown [Populus trichocarpa]
          Length = 467

 Score =  153 bits (386), Expect = 2e-35
 Identities = 78/104 (75%), Positives = 86/104 (82%)
 Frame = +3

Query: 3   CSNFPGEFNSAEVQDSCSLVKKTSEPTFKRPRIETPSPLPTFKVRKEKLGDRITALQQLV 182
           C +   + N  EV+DS S+VKK  EP FKRPRIE PSPLPTFKVRKEKLGDRITALQQLV
Sbjct: 314 CPSLTIQPNREEVRDSVSVVKKGCEPAFKRPRIEAPSPLPTFKVRKEKLGDRITALQQLV 373

Query: 183 SPFGKTDTASVLFEAIEYIKFLHEKVGVLSSLYMKNGVPTQYQQ 314
           SPFGKTDTASVL EAIEYIKFLH++  VLS+ YMKNG P Q+QQ
Sbjct: 374 SPFGKTDTASVLHEAIEYIKFLHDQATVLSTPYMKNGNPIQHQQ 417


>ref|XP_003528420.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
          Length = 495

 Score =  152 bits (384), Expect = 3e-35
 Identities = 79/107 (73%), Positives = 86/107 (80%), Gaps = 5/107 (4%)
 Frame = +3

Query: 9   NFP----GEFNSAEVQDSCSLVKKT-SEPTFKRPRIETPSPLPTFKVRKEKLGDRITALQ 173
           NFP       NS E+ +S S+ KK   EP  KRPRIETPSPLPTFKVRKEKLGDR+TALQ
Sbjct: 337 NFPITLLNRLNSEEILESASMAKKNVCEPALKRPRIETPSPLPTFKVRKEKLGDRVTALQ 396

Query: 174 QLVSPFGKTDTASVLFEAIEYIKFLHEKVGVLSSLYMKNGVPTQYQQ 314
           QLVSPFGKTDTASVL EAIEYIKFLH++V VLS+ YMKNG PTQ QQ
Sbjct: 397 QLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTSYMKNGAPTQQQQ 443


>ref|XP_003532569.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
          Length = 501

 Score =  145 bits (365), Expect = 4e-33
 Identities = 74/105 (70%), Positives = 85/105 (80%), Gaps = 2/105 (1%)
 Frame = +3

Query: 6   SNFPGEFNSAEVQDSCSLVKKTS--EPTFKRPRIETPSPLPTFKVRKEKLGDRITALQQL 179
           S    +FNS +  +S S++ K +  EP  KRPRIET SPLPTFKVRKEKLGDR+TALQQL
Sbjct: 345 STLLNKFNSEKTLESASMMTKKNVCEPALKRPRIETSSPLPTFKVRKEKLGDRVTALQQL 404

Query: 180 VSPFGKTDTASVLFEAIEYIKFLHEKVGVLSSLYMKNGVPTQYQQ 314
           VSPFGKTDTASVL EAIEYIKFLH++V VLS+ YMKNG P Q+QQ
Sbjct: 405 VSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTSYMKNGAPIQHQQ 449


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