BLASTX nr result

ID: Coptis23_contig00037326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037326
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80354.1| hypothetical protein VITISV_003142 [Vitis vinifera]   104   7e-21
ref|XP_002284421.1| PREDICTED: uncharacterized protein LOC100244...   100   2e-19
emb|CBI16193.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002531117.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002313453.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>emb|CAN80354.1| hypothetical protein VITISV_003142 [Vitis vinifera]
          Length = 347

 Score =  104 bits (260), Expect = 7e-21
 Identities = 48/85 (56%), Positives = 67/85 (78%)
 Frame = -3

Query: 258 FNCKEREMEALGSIWGYQESIDELKSMFLHTTLELEAARSDAREEMRKNEENTKQMLCFL 79
           F+   R+ME + S+W +QE+I+ELK   L+ T+ELE+AR +A EEM+KN+E+ KQ+L  L
Sbjct: 24  FSLSHRDMEDMASLWNFQENIEELKQKLLYATIELESARMEANEEMKKNKESIKQLLQLL 83

Query: 78  KVVCQERDEARDQLQRLMNKLMPLS 4
           KV  QERDEARDQLQ+++NK+MP S
Sbjct: 84  KVAYQERDEARDQLQKILNKVMPSS 108


>ref|XP_002284421.1| PREDICTED: uncharacterized protein LOC100244942 [Vitis vinifera]
          Length = 317

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/78 (58%), Positives = 63/78 (80%)
 Frame = -3

Query: 237 MEALGSIWGYQESIDELKSMFLHTTLELEAARSDAREEMRKNEENTKQMLCFLKVVCQER 58
           ME + S+W +QE+I+ELK   L+ T+ELE+AR +A EEM+KN+E+ KQ+L  LKV  QER
Sbjct: 1   MEDMASLWNFQENIEELKQKLLYATIELESARMEANEEMKKNKESIKQLLQLLKVAYQER 60

Query: 57  DEARDQLQRLMNKLMPLS 4
           DEARDQLQ+++NK+MP S
Sbjct: 61  DEARDQLQKILNKVMPSS 78


>emb|CBI16193.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/73 (58%), Positives = 59/73 (80%)
 Frame = -3

Query: 237 MEALGSIWGYQESIDELKSMFLHTTLELEAARSDAREEMRKNEENTKQMLCFLKVVCQER 58
           ME + S+W +QE+I+ELK   L+ T+ELE+AR +A EEM+KN+E+ KQ+L  LKV  QER
Sbjct: 1   MEDMASLWNFQENIEELKQKLLYATIELESARMEANEEMKKNKESIKQLLQLLKVAYQER 60

Query: 57  DEARDQLQRLMNK 19
           DEARDQLQ+++NK
Sbjct: 61  DEARDQLQKILNK 73


>ref|XP_002531117.1| conserved hypothetical protein [Ricinus communis]
           gi|223529313|gb|EEF31282.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/79 (53%), Positives = 59/79 (74%)
 Frame = -3

Query: 237 MEALGSIWGYQESIDELKSMFLHTTLELEAARSDAREEMRKNEENTKQMLCFLKVVCQER 58
           ME LGS+W YQE +DELK   L T +ELE  + +A E +RK++E+ K +L  LK+  +ER
Sbjct: 1   MEELGSLWSYQEGVDELKQKLLCTAIELETLKVEASEAIRKHKEDMKHLLDLLKIAYRER 60

Query: 57  DEARDQLQRLMNKLMPLSS 1
           DEA+DQLQ+L++KLMP S+
Sbjct: 61  DEAKDQLQKLLSKLMPTST 79


>ref|XP_002313453.1| predicted protein [Populus trichocarpa] gi|222849861|gb|EEE87408.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/75 (53%), Positives = 57/75 (76%)
 Frame = -3

Query: 237 MEALGSIWGYQESIDELKSMFLHTTLELEAARSDAREEMRKNEENTKQMLCFLKVVCQER 58
           ME LGS+W Y+ES DELK   ++TT+EL + + +A EEMRK++E+   ++  LK+  QER
Sbjct: 1   MEDLGSMWDYEESFDELKQKLVYTTIELGSLKVEANEEMRKHKEDVNHLINLLKIAYQER 60

Query: 57  DEARDQLQRLMNKLM 13
           DEA+ QLQ+L+NKLM
Sbjct: 61  DEAKGQLQKLVNKLM 75


Top