BLASTX nr result

ID: Coptis23_contig00037316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037316
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302509.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_002511618.1| conserved hypothetical protein [Ricinus comm...   105   3e-21
ref|XP_002275584.1| PREDICTED: uncharacterized protein LOC100247...   105   4e-21
emb|CBI16633.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_002326837.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20

>ref|XP_002302509.1| predicted protein [Populus trichocarpa] gi|222844235|gb|EEE81782.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  110 bits (275), Expect = 1e-22
 Identities = 63/130 (48%), Positives = 87/130 (66%), Gaps = 9/130 (6%)
 Frame = +3

Query: 3   ASQIVSALSTVDDNPNYMH-----IDN-EVKVTIEYGLCEVFNRRNLAR--APKHGKNVG 158
           AS++VSAL  VDD P+ +      ID+ ++KV+IEYGLCE+ NR  +    APK G N G
Sbjct: 86  ASEVVSALCAVDDGPDVVSSLGVTIDSSKLKVSIEYGLCEMLNREAIRSDCAPKDG-NFG 144

Query: 159 FNVSELEAMFPDGTVE-TMEPICDQLPDWQERPESAKLRYATVIR*LAQRFPFENLLLVK 335
           FN+SELEAM P GTV+  ++P+ ++LP W+E    A+ RY  +I+ L  ++P ENLLLV 
Sbjct: 145 FNISELEAMLPTGTVDHAVKPVYEELPQWEETVMGARTRYEQIIKALTDKYPSENLLLVT 204

Query: 336 HKMGVKTAVS 365
           H  GV  +VS
Sbjct: 205 HGEGVGVSVS 214


>ref|XP_002511618.1| conserved hypothetical protein [Ricinus communis]
           gi|223548798|gb|EEF50287.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score =  105 bits (263), Expect = 3e-21
 Identities = 60/130 (46%), Positives = 85/130 (65%), Gaps = 9/130 (6%)
 Frame = +3

Query: 3   ASQIVSALSTVDDNPNYMHID------NEVKVTIEYGLCEVFNRRNLAR--APKHGKNVG 158
           ASQ VSAL  ++D P+    D      ++VKV+IEYGLCE+ N + +    APK GK   
Sbjct: 80  ASQAVSALCALEDGPDVTAGDGIAIDPSKVKVSIEYGLCEMLNTQAIRHDVAPKDGK-FS 138

Query: 159 FNVSELEAMFPDGTVE-TMEPICDQLPDWQERPESAKLRYATVIR*LAQRFPFENLLLVK 335
           FN+SELEA+ P GTV+ T++P+  +LP W+E   S++ RY  +++ LA ++P ENLLLV 
Sbjct: 139 FNISELEALLPSGTVDHTVKPVYQELPRWEETVTSSRTRYEQIVKALADKYPSENLLLVT 198

Query: 336 HKMGVKTAVS 365
           H  GV  +VS
Sbjct: 199 HGEGVGVSVS 208


>ref|XP_002275584.1| PREDICTED: uncharacterized protein LOC100247848 [Vitis vinifera]
          Length = 305

 Score =  105 bits (262), Expect = 4e-21
 Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 9/130 (6%)
 Frame = +3

Query: 3   ASQIVSALSTVDDNPNYMHID------NEVKVTIEYGLCEVFNRR--NLARAPKHGKNVG 158
           AS+++SAL  +DD+P  M  D      +++KV+IE+GLCE+ +R    L  APK G N G
Sbjct: 118 ASEVISALCAIDDDPVNMTGDGVAIDPSKLKVSIEFGLCEMMSREAIRLELAPKDG-NWG 176

Query: 159 FNVSELEAMFPDGTVET-MEPICDQLPDWQERPESAKLRYATVIR*LAQRFPFENLLLVK 335
           FNVSELEAM P GTV+T +E +  +LP ++E    +++RY  VI+ LA +FP ENLLLV 
Sbjct: 177 FNVSELEAMLPAGTVDTTVERVYQELPQYEEGVPGSRIRYEKVIQALADKFPSENLLLVT 236

Query: 336 HKMGVKTAVS 365
           H  GV  ++S
Sbjct: 237 HGEGVGVSIS 246


>emb|CBI16633.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  105 bits (262), Expect = 4e-21
 Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 9/130 (6%)
 Frame = +3

Query: 3   ASQIVSALSTVDDNPNYMHID------NEVKVTIEYGLCEVFNRR--NLARAPKHGKNVG 158
           AS+++SAL  +DD+P  M  D      +++KV+IE+GLCE+ +R    L  APK G N G
Sbjct: 64  ASEVISALCAIDDDPVNMTGDGVAIDPSKLKVSIEFGLCEMMSREAIRLELAPKDG-NWG 122

Query: 159 FNVSELEAMFPDGTVET-MEPICDQLPDWQERPESAKLRYATVIR*LAQRFPFENLLLVK 335
           FNVSELEAM P GTV+T +E +  +LP ++E    +++RY  VI+ LA +FP ENLLLV 
Sbjct: 123 FNVSELEAMLPAGTVDTTVERVYQELPQYEEGVPGSRIRYEKVIQALADKFPSENLLLVT 182

Query: 336 HKMGVKTAVS 365
           H  GV  ++S
Sbjct: 183 HGEGVGVSIS 192


>ref|XP_002326837.1| predicted protein [Populus trichocarpa] gi|222835152|gb|EEE73587.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  102 bits (254), Expect = 3e-20
 Identities = 58/132 (43%), Positives = 83/132 (62%), Gaps = 11/132 (8%)
 Frame = +3

Query: 3   ASQIVSALSTVDDNPNYMHIDN--------EVKVTIEYGLCEVFNRRNLARA--PKHGKN 152
           AS++VSAL  V+D P+ +            +  V+IEYGLCE+ NR  + R   PK G N
Sbjct: 83  ASEVVSALCAVNDGPDIVSSHGVAIDPSKLKAGVSIEYGLCEMLNREAIRRVSVPKDG-N 141

Query: 153 VGFNVSELEAMFPDGTVE-TMEPICDQLPDWQERPESAKLRYATVIR*LAQRFPFENLLL 329
            GFN++EL+A+ P GTV+  ++P+ ++LP W+E    A+ RY  VI+ LA ++P ENLLL
Sbjct: 142 FGFNIAELQALLPAGTVDRAVKPVYEELPQWEETVMGARTRYERVIKTLADKYPSENLLL 201

Query: 330 VKHKMGVKTAVS 365
           V H  GV  +VS
Sbjct: 202 VTHGEGVGVSVS 213


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