BLASTX nr result
ID: Coptis23_contig00037293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00037293
(599 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|2... 196 3e-48
ref|XP_003623623.1| Pentatricopeptide repeat-containing protein ... 157 1e-36
gb|ABR16388.1| unknown [Picea sitchensis] 147 1e-33
ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group] g... 132 4e-29
ref|XP_002467904.1| hypothetical protein SORBIDRAFT_01g036150 [S... 129 3e-28
>ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|222868300|gb|EEF05431.1|
predicted protein [Populus trichocarpa]
Length = 535
Score = 196 bits (498), Expect = 3e-48
Identities = 101/198 (51%), Positives = 132/198 (66%)
Frame = -1
Query: 599 LKPNVVTFNTLFNGYCREGRSLEGVSLLKRMKERDCQPDHISYNTVLHGLLKWGKVLAAL 420
L PNVVTFNTL +GY +EGR L+G +LK MK+R C PD+ISY+T+LHGLL WGKVLA L
Sbjct: 312 LAPNVVTFNTLLDGYAKEGRPLKGFGVLKLMKQRKCMPDYISYSTLLHGLLLWGKVLAGL 371
Query: 419 KVYKEMVEIGFEVDERIMNTLLRGICRRSGANXXXXXXXXXXXERIKSSGSTLYPETHGL 240
+++ EM G E DER+MN+L+RG+CR+S E++K G + T+ L
Sbjct: 372 RIFNEMEGSGLEADERLMNSLVRGLCRKSIKENDLVEVAYEVFEKMKKRGFVIEQSTYAL 431
Query: 239 VIQTLSTRGTVEKALSSLHEMMRIGNPPGLNTFNVVIKALCSEGRVDDAILILVLMSEVG 60
VIQ L V+ A +LH+M+R+G P L T N VI+ALC G+VD A +LVLM E
Sbjct: 432 VIQALWVAKKVDDAFINLHQMVRLGYIPRLITINNVIQALCVGGKVDKAFYVLVLMYENS 491
Query: 59 ELPSRTSYKLMISEFNRQ 6
++PSR SY L+I E NRQ
Sbjct: 492 KIPSRMSYDLLIHELNRQ 509
Score = 60.1 bits (144), Expect = 3e-07
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 2/194 (1%)
Frame = -1
Query: 599 LKPNVVTFNTLFNGYCREGRSLEGVSLLKRMKERDCQPDHISYNTVLHGLLKWGKVLAAL 420
L+PN TF+ + +C++ E +L +M ++ P+ + +++ K G++
Sbjct: 172 LEPNSWTFSIMVRCHCKKKDPGEAKRVLDQMMQKGFNPNVATLTILINSFCKMGQLQNTF 231
Query: 419 KVYKEMVEIGFEVDERIMNTLLRGICRRSGANXXXXXXXXXXXERIKSSGSTLYPE--TH 246
+V++ M IG + + + N LL+G+C + IK +T+ P+ T+
Sbjct: 232 QVFEVMDRIGCKPNIQTYNCLLKGMCYVGRIDEAFELMED-----IKK--TTVEPDIYTY 284
Query: 245 GLVIQTLSTRGTVEKALSSLHEMMRIGNPPGLNTFNVVIKALCSEGRVDDAILILVLMSE 66
++ G ++A+ L+E M +G P + TFN ++ EGR +L LM +
Sbjct: 285 TAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKGFGVLKLMKQ 344
Query: 65 VGELPSRTSYKLMI 24
+P SY ++
Sbjct: 345 RKCMPDYISYSTLL 358
>ref|XP_003623623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498638|gb|AES79841.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 583
Score = 157 bits (398), Expect = 1e-36
Identities = 84/199 (42%), Positives = 119/199 (59%)
Frame = -1
Query: 599 LKPNVVTFNTLFNGYCREGRSLEGVSLLKRMKERDCQPDHISYNTVLHGLLKWGKVLAAL 420
L+P+VVTFN L GY REGR +EGV +LK MKE C D I+Y TVLHGLLKW + + A
Sbjct: 282 LRPDVVTFNALIEGYSREGREMEGVGVLKMMKEHGCVADLINYKTVLHGLLKWNETVEAF 341
Query: 419 KVYKEMVEIGFEVDERIMNTLLRGICRRSGANXXXXXXXXXXXERIKSSGSTLYPETHGL 240
VYKEMV IGFEVD R+M TL+R +C+ S E++K G + T +
Sbjct: 342 GVYKEMVRIGFEVDSRMMGTLVRRLCKLSWREKGLLEDACEVFEKMKERGLVVDKRTVEV 401
Query: 239 VIQTLSTRGTVEKALSSLHEMMRIGNPPGLNTFNVVIKALCSEGRVDDAILILVLMSEVG 60
+++ L ++AL +L++M+R G F VI+ LC +GRVD+A+ L+L+ G
Sbjct: 402 MVEALFRGEKFDEALVNLNDMVRWGYSLEGIAFEEVIEGLCGQGRVDEAVSTLLLLQANG 461
Query: 59 ELPSRTSYKLMISEFNRQG 3
R S+ ++++E N G
Sbjct: 462 GFLDRVSFGVLVNELNAHG 480
Score = 62.8 bits (151), Expect = 4e-08
Identities = 45/192 (23%), Positives = 88/192 (45%)
Frame = -1
Query: 599 LKPNVVTFNTLFNGYCREGRSLEGVSLLKRMKERDCQPDHISYNTVLHGLLKWGKVLAAL 420
L P+ T++ + +C + E +L + E +PD + +++ L K GKV A+
Sbjct: 142 LVPDSCTYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSATITVLINSLCKRGKVKKAM 201
Query: 419 KVYKEMVEIGFEVDERIMNTLLRGICRRSGANXXXXXXXXXXXERIKSSGSTLYPETHGL 240
+V++ + G ++ + N LLRG+ + I G +Y ++
Sbjct: 202 EVFEFLERKGLKLGVQAYNCLLRGLAYVGRVDEAVEILMDMKTGNI---GVDVY--SYSA 256
Query: 239 VIQTLSTRGTVEKALSSLHEMMRIGNPPGLNTFNVVIKALCSEGRVDDAILILVLMSEVG 60
V+ L G ++A+ E + +G P + TFN +I+ EGR + + +L +M E G
Sbjct: 257 VMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVLKMMKEHG 316
Query: 59 ELPSRTSYKLMI 24
+ +YK ++
Sbjct: 317 CVADLINYKTVL 328
>gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 147 bits (371), Expect = 1e-33
Identities = 78/199 (39%), Positives = 114/199 (57%)
Frame = -1
Query: 599 LKPNVVTFNTLFNGYCREGRSLEGVSLLKRMKERDCQPDHISYNTVLHGLLKWGKVLAAL 420
LKPN VT+NTL NGYCR R +E + +LK M + DC PDH++Y T++ GL++ ++ AL
Sbjct: 459 LKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDAL 518
Query: 419 KVYKEMVEIGFEVDERIMNTLLRGICRRSGANXXXXXXXXXXXERIKSSGSTLYPETHGL 240
+++ EM G++V+ +N L RG+ R R+K G + L
Sbjct: 519 RMHDEMENKGYDVNFDTLNILARGLAR-----VGNHKDASIFYRRMKDRGFAYSASDYYL 573
Query: 239 VIQTLSTRGTVEKALSSLHEMMRIGNPPGLNTFNVVIKALCSEGRVDDAILILVLMSEVG 60
I LST G +E+A + L+EM+ G P L T+N +IK C +GR+DDA +L M E G
Sbjct: 574 AIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENG 633
Query: 59 ELPSRTSYKLMISEFNRQG 3
P SY ++I EF+ QG
Sbjct: 634 IGPDTGSYNILIKEFHNQG 652
Score = 65.9 bits (159), Expect = 5e-09
Identities = 50/191 (26%), Positives = 81/191 (42%)
Frame = -1
Query: 596 KPNVVTFNTLFNGYCREGRSLEGVSLLKRMKERDCQPDHISYNTVLHGLLKWGKVLAALK 417
+PN+ T+N L G C R E + L+ M++ P+ +Y + HGL K ++ A +
Sbjct: 390 EPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKE 449
Query: 416 VYKEMVEIGFEVDERIMNTLLRGICRRSGANXXXXXXXXXXXERIKSSGSTLYPETHGLV 237
++ E + G + + NTLL G CR S + + + T T+ +
Sbjct: 450 MFNEALARGLKPNRVTYNTLLNGYCRGS-----RLIEAMDILKEMHQNDCTPDHVTYTTL 504
Query: 236 IQTLSTRGTVEKALSSLHEMMRIGNPPGLNTFNVVIKALCSEGRVDDAILILVLMSEVGE 57
IQ L + AL EM G +T N++ + L G DA + M + G
Sbjct: 505 IQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGF 564
Query: 56 LPSRTSYKLMI 24
S + Y L I
Sbjct: 565 AYSASDYYLAI 575
>ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
gi|108708021|gb|ABF95816.1| expressed protein [Oryza
sativa Japonica Group] gi|113548508|dbj|BAF11951.1|
Os03g0336000 [Oryza sativa Japonica Group]
gi|125543773|gb|EAY89912.1| hypothetical protein
OsI_11461 [Oryza sativa Indica Group]
gi|215712300|dbj|BAG94427.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 545
Score = 132 bits (333), Expect = 4e-29
Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Frame = -1
Query: 599 LKPNVVTFNTLFNGYCREGRSLEGVSLLKRM-KERDCQPDHISYNTVLHGLLKWGKVLAA 423
L P + T+N L NG+C+EG L+ SLL M C PD IS++ VL LL+ G+ AA
Sbjct: 300 LSPTIFTYNALLNGHCKEGNPLKAYSLLMEMCGNAACPPDRISFSIVLQALLRAGETSAA 359
Query: 422 LKVYKEMVEIGFEVDERIMNTLLRGICRRSGANXXXXXXXXXXXERIKSSGSTLYPETHG 243
+ YK M GFE D R ++TL RG+CR+ AN ++ +SG T+
Sbjct: 360 WQAYKRMERAGFEADGRALDTLARGLCRQCAANVAALADAREVFGKLVASGHEPVSYTYC 419
Query: 242 LVIQTLSTRGTVEKALSSLHEMMRIGNPPGLNTFNVVIKALCSEGRVDDAILILVLMSEV 63
L+ Q L+ G V+ A+S L EM R G + V++ALC GR DA+ +L L+
Sbjct: 420 LMAQALARGGEVDAAVSLLGEMARRGYALRKRAYTDVVRALCERGRARDALRVLALVIAR 479
Query: 62 GELPSRTSYKLMISEFNRQG 3
+P R ++ ++ E RQG
Sbjct: 480 DFVPGRNAFDALLGELARQG 499
Score = 60.5 bits (145), Expect = 2e-07
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 6/205 (2%)
Frame = -1
Query: 599 LKPNVVT-----FNTLFNGYCREGRSLEGVSLLKRMKERDCQPDHISYNTVLHGLLKWGK 435
L+PN VT + T CR+G E L M R +P +++ V+ L K G+
Sbjct: 154 LRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMVARGFRPTVATFSAVVGCLCKRGR 213
Query: 434 VLAALKVYKEMVEIGFEVDERIMNTLLRGICRRSGANXXXXXXXXXXXERIKSSGSTLYP 255
V A++V+ M +G E R N+L+ G+C +S T
Sbjct: 214 VTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLEEALDLLNKLK----ESPKQTPDI 269
Query: 254 ETHGLVIQTLSTRGTVEKALSSLHEMMRIGNPPGLNTFNVVIKALCSEGRVDDAI-LILV 78
T +V+ G ++A H+ +R G P + T+N ++ C EG A L++
Sbjct: 270 YTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNGHCKEGNPLKAYSLLME 329
Query: 77 LMSEVGELPSRTSYKLMISEFNRQG 3
+ P R S+ +++ R G
Sbjct: 330 MCGNAACPPDRISFSIVLQALLRAG 354
>ref|XP_002467904.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
gi|241921758|gb|EER94902.1| hypothetical protein
SORBIDRAFT_01g036150 [Sorghum bicolor]
Length = 558
Score = 129 bits (325), Expect = 3e-28
Identities = 73/202 (36%), Positives = 113/202 (55%), Gaps = 3/202 (1%)
Frame = -1
Query: 599 LKPNVVTFNTLFNGYCREGRSLEGVSLLKRMKERD--CQPDHISYNTVLHGLLKWGKVLA 426
L P + T+N L NG+C+EG L+ +LL M D C PD IS+ VL LL+ G+ A
Sbjct: 314 LSPTIFTYNALLNGHCKEGNPLKAFALLMEMCGNDAACPPDKISFGIVLTALLRAGETSA 373
Query: 425 ALKVYKEMVEIGFEVDERIMNTLLRGICRRSGANXXXXXXXXXXXERIKSSGSTLYPETH 246
A + YK M GFEVD R ++TL+RG+ RR + ++ +SG T+
Sbjct: 374 AWQTYKRMERAGFEVDGRALDTLVRGLFRRCATDVSALGDAKEVFAKVVASGHEPVSYTY 433
Query: 245 GLVIQTLSTRGTVEKALSSLHEMMRIGNPPGLNTFNVVIKALCSEGRVDDAILILVLMSE 66
L+ Q L+ G V+ A++ L +M+R G + V++ALC GR DA+ +LVL+
Sbjct: 434 CLMAQALARGGEVDAAVALLEDMVRKGYALRKRAYTDVVRALCDRGRALDALQVLVLVMI 493
Query: 65 VGE-LPSRTSYKLMISEFNRQG 3
V + +P R +++ ++ E +RQG
Sbjct: 494 VRDFVPGRNAFEALLGELSRQG 515
Score = 63.9 bits (154), Expect = 2e-08
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 2/199 (1%)
Frame = -1
Query: 593 PNVVTFNTLFNGYCREGRSLEGVSLLKRMKERDCQPDHISYNTVLHGLLKWGKVLAALKV 414
P+ +F T CR+G E + M R +P +++ V+ L K G+V A++V
Sbjct: 176 PDAQSFATAVQCLCRQGAPDEAKLAIDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEV 235
Query: 413 YKEMVEIGFEVDERIMNTLLRGICRRSGANXXXXXXXXXXXERIKSSGSTLYPETHGLVI 234
+ M +G E R N+L+ G+C ++K S T T +V+
Sbjct: 236 FDAMRALGCEPTIRSYNSLVGGLC-----YVGRLEEALDLLNKLKDSPMTPDIYTFTIVL 290
Query: 233 QTLSTRGTVEKALSSLHEMMRIGNPPGLNTFNVVIKALCSEGRVDDAILILVLM--SEVG 60
G E+A + H+ + +G P + T+N ++ C EG A +L+ M ++
Sbjct: 291 DGFCKVGRTEEATAIFHDAIGMGLSPTIFTYNALLNGHCKEGNPLKAFALLMEMCGNDAA 350
Query: 59 ELPSRTSYKLMISEFNRQG 3
P + S+ ++++ R G
Sbjct: 351 CPPDKISFGIVLTALLRAG 369