BLASTX nr result

ID: Coptis23_contig00037288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037288
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315891.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_003533109.1| PREDICTED: uncharacterized lipoprotein syc11...   145   3e-33
ref|XP_002531070.1| conserved hypothetical protein [Ricinus comm...   143   2e-32
ref|XP_004171155.1| PREDICTED: uncharacterized lipoprotein syc11...   140   1e-31
ref|XP_004150481.1| PREDICTED: uncharacterized lipoprotein syc11...   140   1e-31

>ref|XP_002315891.1| predicted protein [Populus trichocarpa] gi|222864931|gb|EEF02062.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  148 bits (373), Expect = 5e-34
 Identities = 75/118 (63%), Positives = 89/118 (75%)
 Frame = -1

Query: 358 SLLRAVNTLVNLARVNAIAVVGRFPDEDVEGMEDYRQGKGIDLLAGVEAVISHLVVKEFQ 179
           +LLRAV TL+N ++VNA+AVVGRFPD+DVE ++DYRQG GIDLLAGVEAVISHLVVKEFQ
Sbjct: 140 ALLRAVQTLINRSQVNAVAVVGRFPDDDVEDVDDYRQGVGIDLLAGVEAVISHLVVKEFQ 199

Query: 178 IPCXXXXXXXXXXXXXXXXXXXXAEEIGYTFLPCVLAGLSRAPQYIDRNSGALVNGCI 5
           IPC                    AEEIGYTFLPCVL GLS+APQY+ ++S +L  GC+
Sbjct: 200 IPCAHAPAMLPLLLTEDLCPKSAAEEIGYTFLPCVLTGLSKAPQYLVKDSQSLEKGCL 257


>ref|XP_003533109.1| PREDICTED: uncharacterized lipoprotein syc1174_c-like [Glycine max]
          Length = 410

 Score =  145 bits (366), Expect = 3e-33
 Identities = 76/118 (64%), Positives = 87/118 (73%)
 Frame = -1

Query: 358 SLLRAVNTLVNLARVNAIAVVGRFPDEDVEGMEDYRQGKGIDLLAGVEAVISHLVVKEFQ 179
           SLLRAV+TL++ ++VNAIAVVGRFPD+D + ++DYRQG GIDLLAGVEAVISHLVVKEFQ
Sbjct: 186 SLLRAVHTLLSRSKVNAIAVVGRFPDDDTDDVDDYRQGMGIDLLAGVEAVISHLVVKEFQ 245

Query: 178 IPCXXXXXXXXXXXXXXXXXXXXAEEIGYTFLPCVLAGLSRAPQYIDRNSGALVNGCI 5
           IPC                    AEEIGYTFLPCVLAGLS APQY+  +S  L  GCI
Sbjct: 246 IPCAHAPAMSPLPMSLSLSPKSAAEEIGYTFLPCVLAGLSNAPQYLVMDSKCLEKGCI 303


>ref|XP_002531070.1| conserved hypothetical protein [Ricinus communis]
           gi|223529365|gb|EEF31331.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 332

 Score =  143 bits (360), Expect = 2e-32
 Identities = 75/118 (63%), Positives = 86/118 (72%)
 Frame = -1

Query: 358 SLLRAVNTLVNLARVNAIAVVGRFPDEDVEGMEDYRQGKGIDLLAGVEAVISHLVVKEFQ 179
           SLLRAV TLVN ++VNAIAVV RFPD+DV  +++YRQG GID+LAGVEAVISHLVVKEFQ
Sbjct: 155 SLLRAVQTLVNQSQVNAIAVVARFPDDDVVDVDEYRQGMGIDVLAGVEAVISHLVVKEFQ 214

Query: 178 IPCXXXXXXXXXXXXXXXXXXXXAEEIGYTFLPCVLAGLSRAPQYIDRNSGALVNGCI 5
           IPC                    AEEIGYTFLPCVLAGLSRAPQY+ ++S     GC+
Sbjct: 215 IPCAHAPAMLPLPLTLSLCPKSAAEEIGYTFLPCVLAGLSRAPQYLAKDSQFFEKGCL 272


>ref|XP_004171155.1| PREDICTED: uncharacterized lipoprotein syc1174_c-like, partial
           [Cucumis sativus]
          Length = 362

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/118 (59%), Positives = 85/118 (72%)
 Frame = -1

Query: 358 SLLRAVNTLVNLARVNAIAVVGRFPDEDVEGMEDYRQGKGIDLLAGVEAVISHLVVKEFQ 179
           SLLRAV TL+N ++VNA+AVVGRFPD+DVE  + YRQG G+D LAGVEA+ISHLVVKEFQ
Sbjct: 215 SLLRAVQTLMNRSKVNAVAVVGRFPDDDVEEEDSYRQGMGVDTLAGVEAIISHLVVKEFQ 274

Query: 178 IPCXXXXXXXXXXXXXXXXXXXXAEEIGYTFLPCVLAGLSRAPQYIDRNSGALVNGCI 5
           IPC                    AEE+G+TFLPCVL+GLS APQY+ +NS +L   C+
Sbjct: 275 IPCAHAPALSPTPLCTSLSPKSAAEELGFTFLPCVLSGLSNAPQYLSKNSDSLGKDCL 332


>ref|XP_004150481.1| PREDICTED: uncharacterized lipoprotein syc1174_c-like [Cucumis
           sativus]
          Length = 439

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/118 (59%), Positives = 85/118 (72%)
 Frame = -1

Query: 358 SLLRAVNTLVNLARVNAIAVVGRFPDEDVEGMEDYRQGKGIDLLAGVEAVISHLVVKEFQ 179
           SLLRAV TL+N ++VNA+AVVGRFPD+DVE  + YRQG G+D LAGVEA+ISHLVVKEFQ
Sbjct: 215 SLLRAVQTLMNRSKVNAVAVVGRFPDDDVEEEDSYRQGMGVDTLAGVEAIISHLVVKEFQ 274

Query: 178 IPCXXXXXXXXXXXXXXXXXXXXAEEIGYTFLPCVLAGLSRAPQYIDRNSGALVNGCI 5
           IPC                    AEE+G+TFLPCVL+GLS APQY+ +NS +L   C+
Sbjct: 275 IPCAHAPALSPTPLCTSLSPKSAAEELGFTFLPCVLSGLSNAPQYLSKNSDSLGKDCL 332


Top