BLASTX nr result

ID: Coptis23_contig00037285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037285
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784...    59   3e-07
ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago ...    57   2e-06
ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819...    55   4e-06
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06
ref|XP_002332238.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06

>ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784329 [Glycine max]
          Length = 428

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -3

Query: 213 TATMERVFSTINIIKNRLHNWMGDE*LIYCLIA*IEKEIFDSVDTVLILQCFQ 55
           T TMER FS + I+KNRL N MGD  +  CL+  IEK++F+ +D  LI+Q FQ
Sbjct: 367 TTTMERAFSAMKIVKNRLRNRMGDAWMNDCLVTYIEKDVFNKIDNELIIQQFQ 419


>ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago truncatula]
           gi|355478915|gb|AES60118.1| hypothetical protein
           MTR_1g040620 [Medicago truncatula]
          Length = 665

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = -3

Query: 213 TATMERVFSTINIIKNRLHNWMGDE*LIYCLIA*IEKEIFDSVDTVLILQCFQ 55
           TAT+ER FS +  +KN++ N MGDE L  CL+  IE +IFDSV+   ILQ FQ
Sbjct: 604 TATVERSFSAMKFVKNQMRNRMGDEFLNGCLVTYIESDIFDSVENEKILQRFQ 656


>ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819269 [Glycine max]
          Length = 557

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = -3

Query: 213 TATMERVFSTINIIKNRLHNWMGDE*LIYCLIA*IEKEIFDSVDTVLILQCFQ 55
           T+TMER FS + I+KNRL N +GD  +  CL+  IEK++F+ +D   I+Q FQ
Sbjct: 496 TSTMERAFSAMKIVKNRLRNRLGDAWMNDCLVTYIEKDMFNKIDNERIIQRFQ 548


>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -3

Query: 276 KKNIVYQXXXXXXXXXXXLHV-TATMERVFSTINIIKNRLHNWMGDE*LIYCLIA*IEKE 100
           KKN+++            L V TAT+ERVFS ++I+K+RL N MGD+ +   L+  IEK+
Sbjct: 705 KKNLIFPLVYMLIKLSLLLPVATATVERVFSAMHIVKSRLRNRMGDKWMNDSLVVYIEKD 764

Query: 99  IFDSVDTVLILQCFQ 55
           IFD +D   I++ FQ
Sbjct: 765 IFDKIDNEAIMKRFQ 779


>ref|XP_002332238.1| predicted protein [Populus trichocarpa] gi|222831851|gb|EEE70328.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -3

Query: 276 KKNIVYQXXXXXXXXXXXLHV-TATMERVFSTINIIKNRLHNWMGDE*LIYCLIA*IEKE 100
           KKN+++            L V TAT+ERVFS ++I+K+RL N MGD+ +   L+  IEK+
Sbjct: 37  KKNLIFPLVYMLIKLSLLLPVATATVERVFSAMHIVKSRLRNRMGDKWMNDSLVVYIEKD 96

Query: 99  IFDSVDTVLILQCFQ 55
           IFD +D   I++ FQ
Sbjct: 97  IFDKIDNETIMKRFQ 111


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