BLASTX nr result

ID: Coptis23_contig00037242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037242
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510978.1| conserved hypothetical protein [Ricinus comm...   150   2e-34
ref|XP_002869687.1| hypothetical protein ARALYDRAFT_914065 [Arab...   138   5e-31
dbj|BAJ34572.1| unnamed protein product [Thellungiella halophila]     137   1e-30
emb|CAA23058.1| putative protein [Arabidopsis thaliana] gi|72693...   135   3e-30
ref|NP_567716.1| uncharacterized protein [Arabidopsis thaliana] ...   135   3e-30

>ref|XP_002510978.1| conserved hypothetical protein [Ricinus communis]
           gi|223550093|gb|EEF51580.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 342

 Score =  150 bits (378), Expect = 2e-34
 Identities = 79/170 (46%), Positives = 111/170 (65%), Gaps = 7/170 (4%)
 Frame = -1

Query: 518 ASYSQFILDGMSSSSENDSVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNSTMMQSHGG 339
           ASYSQFI D  + + +    +  S P G++HR      E +WMEPS  L NS M+Q +G 
Sbjct: 141 ASYSQFITDKFAYNVDRPVADQISSPTGILHRASPVCPEADWMEPSPHLCNSRMLQRYGP 200

Query: 338 QAARVYDAFRMLKNDPSVQRAVVSLSTDKAVWEAVLNNEVVRELRDSYEAEIN----MPQ 171
              RVYDAF +L+N+PS+QR V+SLS+DKAVW AVLNN+VVRELR++Y  E N     P+
Sbjct: 201 D--RVYDAFHLLQNEPSIQRMVISLSSDKAVWNAVLNNDVVRELRETYNTEENNTLPTPE 258

Query: 170 NSDES---PIPGKNVLWWILDNSKAKVMELIEKVTKLLSEVFQPSQMEKD 30
            SDE+     P  N + WI  N+KAK ME+++K+T L++ +F+   +E +
Sbjct: 259 GSDETSHDSNPATNAVKWIFQNTKAKFMEVLDKITMLMNVLFKAPDVENN 308


>ref|XP_002869687.1| hypothetical protein ARALYDRAFT_914065 [Arabidopsis lyrata subsp.
           lyrata] gi|297315523|gb|EFH45946.1| hypothetical protein
           ARALYDRAFT_914065 [Arabidopsis lyrata subsp. lyrata]
          Length = 345

 Score =  138 bits (348), Expect = 5e-31
 Identities = 72/167 (43%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
 Frame = -1

Query: 539 LQHFLAPASYSQFILDGMSSSSENDSVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNST 360
           LQ     +SY+Q + D      E+   N +    G++H+VPS GS+ +WMEPS+QL +S 
Sbjct: 134 LQQVFDASSYTQLVRDKYECYPESGGENQSPIATGMVHQVPSFGSDSDWMEPSMQLCHSR 193

Query: 359 MMQSHGGQAARVYDAFRMLKNDPSVQRAVVSLSTDKAVWEAVLNNEVVRELRDSYEAEIN 180
            +Q H     +VY+AF +L+ +PSVQ+ VVSLS+DKAVWEAV+NN VVRE+RD Y   I+
Sbjct: 194 TLQPHAYD--QVYNAFDLLRTEPSVQKMVVSLSSDKAVWEAVMNNNVVREIRDLYNNGIS 251

Query: 179 MPQNSDESPIPGKN-----VLWWILDNSKAKVMELIEKVTKLLSEVF 54
             + S E   PG+N      + W+ DN+  K  E+  K+TK+++E+F
Sbjct: 252 QDEESSED-TPGENNAAVDFIKWVFDNTMVKATEVFVKITKVVTELF 297


>dbj|BAJ34572.1| unnamed protein product [Thellungiella halophila]
          Length = 347

 Score =  137 bits (344), Expect = 1e-30
 Identities = 71/167 (42%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
 Frame = -1

Query: 539 LQHFLAPASYSQFILDGMSSSSENDSVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNST 360
           LQ     +SY Q + D   S  EN     +    G++H+VPS GS+++WMEPS+QL  S 
Sbjct: 136 LQQVFDGSSYPQLVRDRYESYPENGGGKQSPIATGMVHQVPSFGSDLDWMEPSMQLCQSR 195

Query: 359 MMQSHGGQAARVYDAFRMLKNDPSVQRAVVSLSTDKAVWEAVLNNEVVRELRDSYEAEIN 180
           ++Q H     +VY+AF +L+ +PSVQR V+SLS+DK+VWEAV+NNEVVRE+++ Y   I+
Sbjct: 196 VLQPHAYD--QVYNAFDLLRTEPSVQRMVISLSSDKSVWEAVMNNEVVREIKELYNNGIS 253

Query: 179 MPQNSDESPIPGKN-----VLWWILDNSKAKVMELIEKVTKLLSEVF 54
             + S +   PG+N      + WI DN+  K  E+  K+TK++ E+F
Sbjct: 254 KDEESSDD-TPGENNAAMGFIKWIFDNTMVKATEVFAKITKVVVELF 299


>emb|CAA23058.1| putative protein [Arabidopsis thaliana] gi|7269367|emb|CAB79426.1|
           putative protein [Arabidopsis thaliana]
          Length = 336

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/166 (42%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
 Frame = -1

Query: 539 LQHFLAPASYSQFILDGMSSSSENDSVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNST 360
           LQ     +SYSQ + D      EN   N +    G++H+VPS GS+ +WMEPS+ L +S 
Sbjct: 127 LQQVFDASSYSQLVRDKYECYPENGGGNQSPIATGMVHQVPSFGSDSDWMEPSMHLCHSR 186

Query: 359 MMQSHGGQAARVYDAFRMLKNDPSVQRAVVSLSTDKAVWEAVLNNEVVRELRDSYEAEIN 180
            ++ H     +VY+AF +L+ +PSVQ+ VVSLS+DKAVWEAV+NN+VVRE+RD Y   I+
Sbjct: 187 TLKPHAYD--QVYNAFDLLRTEPSVQKMVVSLSSDKAVWEAVMNNDVVREIRDLYNNGIS 244

Query: 179 M-PQNSDESPIPGK---NVLWWILDNSKAKVMELIEKVTKLLSEVF 54
              +NS+++P       + + W+ DN+  K  E+  K+TK+++E+F
Sbjct: 245 QDEENSEDTPRENNAATDFIKWVFDNTMVKATEVFVKITKVVTELF 290


>ref|NP_567716.1| uncharacterized protein [Arabidopsis thaliana]
           gi|17979333|gb|AAL49892.1| unknown protein [Arabidopsis
           thaliana] gi|21593405|gb|AAM65372.1| unknown
           [Arabidopsis thaliana] gi|21689835|gb|AAM67561.1|
           unknown protein [Arabidopsis thaliana]
           gi|332659619|gb|AEE85019.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 344

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/166 (42%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
 Frame = -1

Query: 539 LQHFLAPASYSQFILDGMSSSSENDSVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNST 360
           LQ     +SYSQ + D      EN   N +    G++H+VPS GS+ +WMEPS+ L +S 
Sbjct: 135 LQQVFDASSYSQLVRDKYECYPENGGGNQSPIATGMVHQVPSFGSDSDWMEPSMHLCHSR 194

Query: 359 MMQSHGGQAARVYDAFRMLKNDPSVQRAVVSLSTDKAVWEAVLNNEVVRELRDSYEAEIN 180
            ++ H     +VY+AF +L+ +PSVQ+ VVSLS+DKAVWEAV+NN+VVRE+RD Y   I+
Sbjct: 195 TLKPHAYD--QVYNAFDLLRTEPSVQKMVVSLSSDKAVWEAVMNNDVVREIRDLYNNGIS 252

Query: 179 M-PQNSDESPIPGK---NVLWWILDNSKAKVMELIEKVTKLLSEVF 54
              +NS+++P       + + W+ DN+  K  E+  K+TK+++E+F
Sbjct: 253 QDEENSEDTPRENNAATDFIKWVFDNTMVKATEVFVKITKVVTELF 298


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