BLASTX nr result

ID: Coptis23_contig00037237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037237
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28324.3| unnamed protein product [Vitis vinifera]              266   2e-69
ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-l...   266   2e-69
emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]   266   2e-69
gb|ABK24901.1| unknown [Picea sitchensis]                             259   4e-67
gb|ABR16201.1| unknown [Picea sitchensis]                             259   5e-67

>emb|CBI28324.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  266 bits (681), Expect = 2e-69
 Identities = 135/238 (56%), Positives = 166/238 (69%)
 Frame = +3

Query: 6   KYLRSSLLPEQQQAHWFXXXXXXXXXXLLAGLSSTLFIQNLRNELRKYSXXXXXXXXXXV 185
           KY R+SL P  QQ  WF          LL GL + +F+++L+N+LRK+S          V
Sbjct: 261 KYSRASLFPTHQQIRWFSFINSFVIIVLLMGLLTMIFMRHLKNDLRKFSGGDEEEDKE-V 319

Query: 186 GWKHLHGDVFRYPPNISLFCAIMGSGTQLLTLFCFLFVLAFVGVIYPYNRGALYTSFVVV 365
           GWK++HGDVFRYPP +SLFCA++G+GTQLL    FLFVLA +GV+YPYNRGAL TS VV 
Sbjct: 320 GWKYIHGDVFRYPPCMSLFCAVLGTGTQLLIQAAFLFVLALLGVLYPYNRGALCTSLVVT 379

Query: 366 YALTSFIAGYTAASFRTKLAGTGQEVTKSVYLTGVLYLGPLFFTFTVLNTVAISYRATAA 545
           Y LTS +AGYTA+SF  +   TG +  +SV L+G LYLGPLF   ++LN VA+SY ATAA
Sbjct: 380 YTLTSVVAGYTASSFYNQFVETGWK--RSVLLSGTLYLGPLFVMVSILNAVAVSYGATAA 437

Query: 546 LPFGTIAALFLIWTVVVIPFLCAGGLIGRLYSSDFQAPCATRRMPLEIPPLPWYRKMP 719
           LPFGTI  + LI+T   IP L  GG+IG    S+FQAPCAT+R P EIPPL WYRK P
Sbjct: 438 LPFGTIVVILLIYTFFTIPLLGLGGVIGYRLRSEFQAPCATKRCPREIPPLAWYRKTP 495


>ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-like [Vitis vinifera]
          Length = 608

 Score =  266 bits (681), Expect = 2e-69
 Identities = 135/238 (56%), Positives = 166/238 (69%)
 Frame = +3

Query: 6   KYLRSSLLPEQQQAHWFXXXXXXXXXXLLAGLSSTLFIQNLRNELRKYSXXXXXXXXXXV 185
           KY R+SL P  QQ  WF          LL GL + +F+++L+N+LRK+S          V
Sbjct: 233 KYSRASLFPTHQQIRWFSFINSFVIIVLLMGLLTMIFMRHLKNDLRKFSGGDEEEDKE-V 291

Query: 186 GWKHLHGDVFRYPPNISLFCAIMGSGTQLLTLFCFLFVLAFVGVIYPYNRGALYTSFVVV 365
           GWK++HGDVFRYPP +SLFCA++G+GTQLL    FLFVLA +GV+YPYNRGAL TS VV 
Sbjct: 292 GWKYIHGDVFRYPPCMSLFCAVLGTGTQLLIQAAFLFVLALLGVLYPYNRGALCTSLVVT 351

Query: 366 YALTSFIAGYTAASFRTKLAGTGQEVTKSVYLTGVLYLGPLFFTFTVLNTVAISYRATAA 545
           Y LTS +AGYTA+SF  +   TG +  +SV L+G LYLGPLF   ++LN VA+SY ATAA
Sbjct: 352 YTLTSVVAGYTASSFYNQFVETGWK--RSVLLSGTLYLGPLFVMVSILNAVAVSYGATAA 409

Query: 546 LPFGTIAALFLIWTVVVIPFLCAGGLIGRLYSSDFQAPCATRRMPLEIPPLPWYRKMP 719
           LPFGTI  + LI+T   IP L  GG+IG    S+FQAPCAT+R P EIPPL WYRK P
Sbjct: 410 LPFGTIVVILLIYTFFTIPLLGLGGVIGYRLRSEFQAPCATKRCPREIPPLAWYRKTP 467


>emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]
          Length = 920

 Score =  266 bits (681), Expect = 2e-69
 Identities = 135/238 (56%), Positives = 166/238 (69%)
 Frame = +3

Query: 6   KYLRSSLLPEQQQAHWFXXXXXXXXXXLLAGLSSTLFIQNLRNELRKYSXXXXXXXXXXV 185
           KY R+SL P  QQ  WF          LL GL + +F+++L+N+LRK+S          V
Sbjct: 217 KYSRASLFPTHQQIRWFSFINSFVIIVLLMGLLTMIFMRHLKNDLRKFSGGDEEEDKE-V 275

Query: 186 GWKHLHGDVFRYPPNISLFCAIMGSGTQLLTLFCFLFVLAFVGVIYPYNRGALYTSFVVV 365
           GWK++HGDVFRYPP +SLFCA++G+GTQLL    FLFVLA +GV+YPYNRGAL TS VV 
Sbjct: 276 GWKYIHGDVFRYPPCMSLFCAVLGTGTQLLIQAAFLFVLALLGVLYPYNRGALCTSLVVT 335

Query: 366 YALTSFIAGYTAASFRTKLAGTGQEVTKSVYLTGVLYLGPLFFTFTVLNTVAISYRATAA 545
           Y LTS +AGYTA+SF  +   TG +  +SV L+G LYLGPLF   ++LN VA+SY ATAA
Sbjct: 336 YTLTSVVAGYTASSFYNQFVETGWK--RSVLLSGTLYLGPLFVMVSILNAVAVSYGATAA 393

Query: 546 LPFGTIAALFLIWTVVVIPFLCAGGLIGRLYSSDFQAPCATRRMPLEIPPLPWYRKMP 719
           LPFGTI  + LI+T   IP L  GG+IG    S+FQAPCAT+R P EIPPL WYRK P
Sbjct: 394 LPFGTIVVILLIYTFFTIPLLGLGGVIGYRLRSEFQAPCATKRCPREIPPLAWYRKTP 451


>gb|ABK24901.1| unknown [Picea sitchensis]
          Length = 585

 Score =  259 bits (662), Expect = 4e-67
 Identities = 129/236 (54%), Positives = 161/236 (68%), Gaps = 1/236 (0%)
 Frame = +3

Query: 6   KYLRSSLLPEQQQAHWFXXXXXXXXXXLLAGLSSTLFIQNLRNELRKYSXXXXXXXXXX- 182
           KY +SS LP+  + HWF          LL G  +T+ ++ L+N+  KYS           
Sbjct: 207 KYSKSSSLPQHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFIKYSHDEESTDDQEE 266

Query: 183 VGWKHLHGDVFRYPPNISLFCAIMGSGTQLLTLFCFLFVLAFVGVIYPYNRGALYTSFVV 362
            GWK++HGDVFRYPP+ SLFCA++GSGTQL TL  F+F+LA VGV YPYNRGALYT+ VV
Sbjct: 267 TGWKYIHGDVFRYPPHKSLFCAVLGSGTQLFTLAIFIFMLALVGVFYPYNRGALYTALVV 326

Query: 363 VYALTSFIAGYTAASFRTKLAGTGQEVTKSVYLTGVLYLGPLFFTFTVLNTVAISYRATA 542
           +YALTS IAGYTAASF  +L G+     +++ +TG L+ GPLF TF  LNTVAI+Y ATA
Sbjct: 327 IYALTSGIAGYTAASFYRQLEGSNW--VRNLLMTGCLFCGPLFLTFCFLNTVAIAYNATA 384

Query: 543 ALPFGTIAALFLIWTVVVIPFLCAGGLIGRLYSSDFQAPCATRRMPLEIPPLPWYR 710
           ALPFGTI  + LIWT+V  P L  GG+ G+    +FQAPC T + P EIP LPWYR
Sbjct: 385 ALPFGTIVVILLIWTLVTSPLLVLGGIAGKNSKVEFQAPCRTTKYPREIPTLPWYR 440


>gb|ABR16201.1| unknown [Picea sitchensis]
          Length = 585

 Score =  259 bits (661), Expect = 5e-67
 Identities = 130/235 (55%), Positives = 161/235 (68%), Gaps = 1/235 (0%)
 Frame = +3

Query: 9   YLRSSLLPEQQQAHWFXXXXXXXXXXLLAGLSSTLFIQNLRNELRKYSXXXXXXXXXX-V 185
           Y +SS LP+  + HWF          LL G  +T+ ++ L+N+  KYS            
Sbjct: 208 YSKSSSLPQHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFIKYSHDEETADEQEET 267

Query: 186 GWKHLHGDVFRYPPNISLFCAIMGSGTQLLTLFCFLFVLAFVGVIYPYNRGALYTSFVVV 365
           GWK++HGDVFRYPP+ SLF A++GSGTQLL L  F+F+LA VGV YPYNRGALYT+ VV+
Sbjct: 268 GWKYIHGDVFRYPPHKSLFSAVLGSGTQLLALAIFIFMLALVGVFYPYNRGALYTALVVI 327

Query: 366 YALTSFIAGYTAASFRTKLAGTGQEVTKSVYLTGVLYLGPLFFTFTVLNTVAISYRATAA 545
           YALTS IAGYTAASF  +L GT     +++ LTG L+ GPLF TF  LNTVAI+Y ATAA
Sbjct: 328 YALTSGIAGYTAASFYRQLEGTNW--VRNLLLTGCLFCGPLFLTFCFLNTVAIAYNATAA 385

Query: 546 LPFGTIAALFLIWTVVVIPFLCAGGLIGRLYSSDFQAPCATRRMPLEIPPLPWYR 710
           LPFGTI  + LIWT+V  P L  GG+ G+   ++FQAPC T + P EIPPLPWYR
Sbjct: 386 LPFGTILVILLIWTLVTSPLLVLGGIAGKNSRAEFQAPCRTTKYPREIPPLPWYR 440


Top