BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037210
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
emb|CBI24234.3| unnamed protein product [Vitis vinifera]               87   2e-15
emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]    87   2e-15
ref|XP_003617310.1| Pentatricopeptide repeat-containing protein ...    84   1e-14
ref|XP_002299984.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14

>ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/67 (58%), Positives = 54/67 (80%)
 Frame = +2

Query: 2   DDVADAEELFDELLNRGLVPDIVSFSLLIGLFSRKGDVDKALVYVQDMNELGLVPDSVVY 181
           D++ DAE +FDE+ ++G+VPD+VSFS LIGL S+ G +D+AL Y +DM   GL PD+V+Y
Sbjct: 373 DNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 432

Query: 182 TMLIGGF 202
           T+LIGGF
Sbjct: 433 TILIGGF 439



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/65 (40%), Positives = 42/65 (64%)
 Frame = +2

Query: 8   VADAEELFDELLNRGLVPDIVSFSLLIGLFSRKGDVDKALVYVQDMNELGLVPDSVVYTM 187
           +++A+ELF E+  RG+ PD  +F+ LI  +S+ G+++KA+   + M +  L PD V Y  
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539

Query: 188 LIGGF 202
           LI GF
Sbjct: 540 LIDGF 544


>emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/67 (58%), Positives = 54/67 (80%)
 Frame = +2

Query: 2   DDVADAEELFDELLNRGLVPDIVSFSLLIGLFSRKGDVDKALVYVQDMNELGLVPDSVVY 181
           D++ DAE +FDE+ ++G+VPD+VSFS LIGL S+ G +D+AL Y +DM   GL PD+V+Y
Sbjct: 216 DNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 275

Query: 182 TMLIGGF 202
           T+LIGGF
Sbjct: 276 TILIGGF 282



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/65 (40%), Positives = 42/65 (64%)
 Frame = +2

Query: 8   VADAEELFDELLNRGLVPDIVSFSLLIGLFSRKGDVDKALVYVQDMNELGLVPDSVVYTM 187
           +++A+ELF E+  RG+ PD  +F+ LI  +S+ G+++KA+   + M +  L PD V Y  
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382

Query: 188 LIGGF 202
           LI GF
Sbjct: 383 LIDGF 387


>emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/67 (58%), Positives = 54/67 (80%)
 Frame = +2

Query: 2   DDVADAEELFDELLNRGLVPDIVSFSLLIGLFSRKGDVDKALVYVQDMNELGLVPDSVVY 181
           D++ DAE +FDE+ ++G+VPD+VSFS LIGL S+ G +D+AL Y +DM   GL PD+V+Y
Sbjct: 477 DNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 536

Query: 182 TMLIGGF 202
           T+LIGGF
Sbjct: 537 TILIGGF 543


>ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518645|gb|AET00269.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 716

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 35/67 (52%), Positives = 55/67 (82%)
 Frame = +2

Query: 2   DDVADAEELFDELLNRGLVPDIVSFSLLIGLFSRKGDVDKALVYVQDMNELGLVPDSVVY 181
           +DV +AE +F+E+L RG+VPD++SFS ++G+FSR G++ +AL Y + M  +GLVPD+V+Y
Sbjct: 343 EDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIY 402

Query: 182 TMLIGGF 202
           T+LI G+
Sbjct: 403 TILINGY 409


>ref|XP_002299984.1| predicted protein [Populus trichocarpa] gi|222847242|gb|EEE84789.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/67 (53%), Positives = 55/67 (82%)
 Frame = +2

Query: 2   DDVADAEELFDELLNRGLVPDIVSFSLLIGLFSRKGDVDKALVYVQDMNELGLVPDSVVY 181
           D+ ++A+E+F E+L +G+VPD+VSFS LI +FSR   +D+ALVY +DM + GLVPD+V+Y
Sbjct: 237 DNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 296

Query: 182 TMLIGGF 202
           T+L+ G+
Sbjct: 297 TVLMHGY 303



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/66 (33%), Positives = 43/66 (65%)
 Frame = +2

Query: 5   DVADAEELFDELLNRGLVPDIVSFSLLIGLFSRKGDVDKALVYVQDMNELGLVPDSVVYT 184
           D + A+E    ++ +G+ PD +S++ LI  F R+ ++DKA +++  M + GL+PD + Y 
Sbjct: 483 DSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYN 542

Query: 185 MLIGGF 202
           +++ GF
Sbjct: 543 VVMNGF 548