BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037188
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CBI36234.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...   178   5e-43
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   176   2e-42

>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  193 bits (490), Expect = 1e-47
 Identities = 86/123 (69%), Positives = 105/123 (85%)
 Frame = +2

Query: 2    GQLHAFLSGDGSHPQIEQINAVLIGFYERMKTAGIDIFSNRFSDEVKTSKEDIFCGHSER 181
            GQ+HAFL+GD  HPQI++INAVL GFYE+M+  G+ +  +   D++  SK +IFCGHSER
Sbjct: 743  GQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFCGHSER 802

Query: 182  LAVAFGLINTLPGMPIRVTKNLYTCKNCHNTVKFISRIVRREITVRDTEQFHHFKDGICS 361
            LA+AFGLINT+PG PI VTKNLY C+NCHNTVKFIS++VRR I+VRDTEQFHHFKDG+CS
Sbjct: 803  LAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCS 862

Query: 362  CGD 370
            CGD
Sbjct: 863  CGD 865


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  193 bits (490), Expect = 1e-47
 Identities = 86/123 (69%), Positives = 105/123 (85%)
 Frame = +2

Query: 2    GQLHAFLSGDGSHPQIEQINAVLIGFYERMKTAGIDIFSNRFSDEVKTSKEDIFCGHSER 181
            GQ+HAFL+GD  HPQI++INAVL GFYE+M+  G+ +  +   D++  SK +IFCGHSER
Sbjct: 743  GQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFCGHSER 802

Query: 182  LAVAFGLINTLPGMPIRVTKNLYTCKNCHNTVKFISRIVRREITVRDTEQFHHFKDGICS 361
            LA+AFGLINT+PG PI VTKNLY C+NCHNTVKFIS++VRR I+VRDTEQFHHFKDG+CS
Sbjct: 803  LAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCS 862

Query: 362  CGD 370
            CGD
Sbjct: 863  CGD 865


>ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|222840702|gb|EEE78249.1|
            predicted protein [Populus trichocarpa]
          Length = 805

 Score =  186 bits (473), Expect = 1e-45
 Identities = 85/123 (69%), Positives = 104/123 (84%)
 Frame = +2

Query: 2    GQLHAFLSGDGSHPQIEQINAVLIGFYERMKTAGIDIFSNRFSDEVKTSKEDIFCGHSER 181
            G++HAFLSGD  HPQ+++IN VL GFYE+MKT+G +       D ++TSK DIFCGHSER
Sbjct: 683  GKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSSMDGIQTSKADIFCGHSER 742

Query: 182  LAVAFGLINTLPGMPIRVTKNLYTCKNCHNTVKFISRIVRREITVRDTEQFHHFKDGICS 361
             A+A+ LIN+ PGMPI VTKNLY C++CH+TVKFIS+IVRREI+VRDTEQFHHFKDG+CS
Sbjct: 743  QAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCS 802

Query: 362  CGD 370
            CGD
Sbjct: 803  CGD 805


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  178 bits (451), Expect = 5e-43
 Identities = 81/123 (65%), Positives = 98/123 (79%)
 Frame = +2

Query: 2    GQLHAFLSGDGSHPQIEQINAVLIGFYERMKTAGIDIFSNRFSDEVKTSKEDIFCGHSER 181
            G++HAFLSGD SH Q ++IN VL GF  +MK  G     + F+ E+++S+ DIFCGHSER
Sbjct: 746  GKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCGHSER 805

Query: 182  LAVAFGLINTLPGMPIRVTKNLYTCKNCHNTVKFISRIVRREITVRDTEQFHHFKDGICS 361
             A+AFGLINT PGMPI VTKNLY C +CHN VKFIS IVRREI+VRD E++HHFKDG+CS
Sbjct: 806  QAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCS 865

Query: 362  CGD 370
            CGD
Sbjct: 866  CGD 868


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  176 bits (445), Expect = 2e-42
 Identities = 80/123 (65%), Positives = 97/123 (78%)
 Frame = +2

Query: 2    GQLHAFLSGDGSHPQIEQINAVLIGFYERMKTAGIDIFSNRFSDEVKTSKEDIFCGHSER 181
            G++HAFLSGD SH Q ++IN VL GF  +MK  G     + F+ E+++S+ DIFCGHSER
Sbjct: 746  GKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCGHSER 805

Query: 182  LAVAFGLINTLPGMPIRVTKNLYTCKNCHNTVKFISRIVRREITVRDTEQFHHFKDGICS 361
             A+AFGLINT PGMPI V KNLY C +CHN VKFIS IVRREI+VRD E++HHFKDG+CS
Sbjct: 806  QAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCS 865

Query: 362  CGD 370
            CGD
Sbjct: 866  CGD 868