BLASTX nr result
ID: Coptis23_contig00037183
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00037183 (502 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containi... 227 9e-58 ref|XP_002526186.1| pentatricopeptide repeat-containing protein,... 217 9e-55 ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|2... 214 4e-54 ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containi... 209 2e-52 ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 207 5e-52 >ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Vitis vinifera] gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera] Length = 695 Score = 227 bits (578), Expect = 9e-58 Identities = 110/167 (65%), Positives = 135/167 (80%) Frame = +2 Query: 2 SMISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKER 181 SMISGYL+NG+P+ C +LF EM+S G+ PD VT+S+IL A FQ G ++EA + FR +KE+ Sbjct: 226 SMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEK 285 Query: 182 DKVCWTAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDHGKVVH 361 DKVCWT M+VG QN +EEDAL++F EML E+VRPDN+TISSVVS+CARLASL G+ VH Sbjct: 286 DKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVH 345 Query: 362 CKAVLTGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNVVSWN 502 KAV+ G + DLLVSSAL+DMYSKCGE DAWIVF M RNV+SWN Sbjct: 346 GKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWN 392 Score = 89.0 bits (219), Expect = 4e-16 Identities = 52/162 (32%), Positives = 85/162 (52%) Frame = +2 Query: 17 YLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKERDKVCW 196 Y ++G + +LF++M + D+ + +++L A +SG +E+ +F M D V + Sbjct: 68 YAKSGNLSDARDLFDKMS----RRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSY 123 Query: 197 TAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDHGKVVHCKAVL 376 +I G+ N AL F M E +YT SV+ AC++L + GK +H + V Sbjct: 124 NTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVA 183 Query: 377 TGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNVVSWN 502 T + V +AL +MY+KCG + A +F M +NVVSWN Sbjct: 184 TSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWN 225 Score = 70.1 bits (170), Expect = 2e-10 Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 35/152 (23%) Frame = +2 Query: 2 SMISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQ----------------- 130 +M+ G +NG+ ++ L LF EM ++PD T+SS++ + + Sbjct: 292 TMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIF 351 Query: 131 ------------------SGLLEEATRMFRGMKERDKVCWTAMIVGYMQNKREEDALMIF 256 G +A +F+ M R+ + W +MI+GY QN ++ +AL ++ Sbjct: 352 GVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALY 411 Query: 257 SEMLSEDVRPDNYTISSVVSACARLASLDHGK 352 EML E+++PDN T V+SAC ++ G+ Sbjct: 412 EEMLHENLKPDNITFVGVLSACMHAGLVERGQ 443 Score = 62.0 bits (149), Expect = 5e-08 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%) Frame = +2 Query: 2 SMISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQ----------------- 130 ++I+G+ NG + LE F M+ G + T S+L A Q Sbjct: 125 TVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVAT 184 Query: 131 ------------------SGLLEEATRMFRGMKERDKVCWTAMIVGYMQNKREEDALMIF 256 G L++A +F M ++ V W +MI GY+QN + E +F Sbjct: 185 SLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLF 244 Query: 257 SEMLSEDVRPDNYTISSVVSACARLASLDHGKVVHCKAVLTGFEGDLLVSSALIDMYSKC 436 EM S + PD TIS+++SA + +D CK E D + + ++ ++ Sbjct: 245 CEMQSSGLMPDQVTISNILSAYFQCGYIDEA----CKTFREIKEKDKVCWTTMMVGCAQN 300 Query: 437 GEVVDAWIVFGMMPVRNV 490 G+ DA ++F M + NV Sbjct: 301 GKEEDALLLFREMLLENV 318 >ref|XP_002526186.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223534490|gb|EEF36190.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 446 Score = 217 bits (552), Expect = 9e-55 Identities = 105/167 (62%), Positives = 138/167 (82%) Frame = +2 Query: 2 SMISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKER 181 SMISGYL+NG+ + + LF+EM+ LG++PD VTVS++L A FQSG ++ AT++F +E+ Sbjct: 228 SMISGYLKNGQFEIGINLFHEMQGLGLKPDQVTVSNVLCAYFQSGYIDGATKLFSETREK 287 Query: 182 DKVCWTAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDHGKVVH 361 DKVCWT MIVGY QN +EE+ALM+F+EML E+VRPD+YTISSVVS+CA+LASL HG+V+H Sbjct: 288 DKVCWTTMIVGYTQNGKEENALMLFNEML-ENVRPDSYTISSVVSSCAKLASLIHGQVIH 346 Query: 362 CKAVLTGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNVVSWN 502 A+L G + DLLVS++L+DMY KCG DAW+VF MMP R+VVSWN Sbjct: 347 GIALLMGIDDDLLVSTSLVDMYCKCGVTSDAWVVFSMMPARSVVSWN 393 Score = 90.5 bits (223), Expect = 1e-16 Identities = 54/164 (32%), Positives = 91/164 (55%), Gaps = 2/164 (1%) Frame = +2 Query: 17 YLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKERDKVCW 196 Y + G+ LF++M D+ + +++L ++GL+E+ +F M RD V + Sbjct: 69 YAKLGKISHARYLFDKMS----YRDIFSWNAMLSLYAKAGLVEDLRVVFDDMPSRDSVSY 124 Query: 197 TAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDHGKVVHCKAVL 376 +I G+ +N R A+ F M +E +P YT SV++AC +L L GK +H + +L Sbjct: 125 NTVITGFAKNGRAGKAVEAFVRMQTEGFKPTEYTHVSVLNACTQLLDLRKGKQIHGR-IL 183 Query: 377 TG--FEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNVVSWN 502 TG G++ + +AL DMY+KC E+ A +F + +N+VSWN Sbjct: 184 TGNYLGGNVFIWNALTDMYAKCKEIDQARWLFDRLANKNMVSWN 227 Score = 70.5 bits (171), Expect = 1e-10 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 34/148 (22%) Frame = +2 Query: 2 SMISGYLRNGRPKECLELFNEMKS----------------------------------LG 79 +MI GY +NG+ + L LFNEM +G Sbjct: 294 TMIVGYTQNGKEENALMLFNEMLENVRPDSYTISSVVSSCAKLASLIHGQVIHGIALLMG 353 Query: 80 IQPDLVTVSSILGASFQSGLLEEATRMFRGMKERDKVCWTAMIVGYMQNKREEDALMIFS 259 I DL+ +S++ + G+ +A +F M R V W AM+ GY +N ++ +AL ++ Sbjct: 354 IDDDLLVSTSLVDMYCKCGVTSDAWVVFSMMPARSVVSWNAMLGGYARNGQDLEALALYE 413 Query: 260 EMLSEDVRPDNYTISSVVSACARLASLD 343 +M E++RPDN T V+SAC D Sbjct: 414 KMFQENIRPDNITFVGVLSACNHAGLFD 441 >ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa] Length = 695 Score = 214 bits (546), Expect = 4e-54 Identities = 102/166 (61%), Positives = 131/166 (78%) Frame = +2 Query: 5 MISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKERD 184 MISGYL+N +P++C++LF+EM+ ++PD VT SS+LGA Q+G ++EA ++F ++E+D Sbjct: 227 MISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKD 286 Query: 185 KVCWTAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDHGKVVHC 364 +VCWT MIVG QN +EEDAL++FSEML E+ RPD YTISSVVS+CA+LASL HG+VVH Sbjct: 287 EVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHG 346 Query: 365 KAVLTGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNVVSWN 502 KA L G DLLVSSAL+DMY KCG DAW +F M RNVVSWN Sbjct: 347 KAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWN 392 Score = 106 bits (265), Expect = 2e-21 Identities = 57/166 (34%), Positives = 95/166 (57%) Frame = +2 Query: 5 MISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKERD 184 +++ Y ++G +LF+EM Q D + +++L +SGL+E+ +F M RD Sbjct: 64 LLNLYAKSGEISHARKLFDEMT----QRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRD 119 Query: 185 KVCWTAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDHGKVVHC 364 V + +I G+ N R AL +F M E ++P YT SV++AC +L L GK +H Sbjct: 120 SVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHG 179 Query: 365 KAVLTGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNVVSWN 502 + ++ G++ V +AL D+Y++CGE+ A +F M +RNVV+WN Sbjct: 180 RIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWN 225 Score = 69.3 bits (168), Expect = 3e-10 Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 35/155 (22%) Frame = +2 Query: 5 MISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSIL----------------GASF--- 127 MI G +NG+ ++ L LF+EM +PD T+SS++ G +F Sbjct: 293 MIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMG 352 Query: 128 ----------------QSGLLEEATRMFRGMKERDKVCWTAMIVGYMQNKREEDALMIFS 259 + G+ +A +F M+ R+ V W +MI GY N ++ +AL ++ Sbjct: 353 VNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYE 412 Query: 260 EMLSEDVRPDNYTISSVVSACARLASLDHGKVVHC 364 ML E+++PD+ T V+SAC ++ GK C Sbjct: 413 NMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFC 447 Score = 57.4 bits (137), Expect = 1e-06 Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Frame = +2 Query: 2 SMISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKER 181 SMI GY NG+ E L L+ M ++PD VT +L A +GL+EE F M ++ Sbjct: 393 SMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQ 452 Query: 182 DKV-----CWTAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDH 346 + + M+ + ++ + A+ + S M E P++ ++V+S C + H Sbjct: 453 HGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQE---PNSLIWTTVLSVCVMKGDIKH 509 Query: 347 GKV-VHCKAVLTGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNV 490 G++ C L F + L +MY+ G D + +M ++V Sbjct: 510 GEMAARCLIELNPFNAVPYI--MLSNMYAARGRWKDVASIRSLMKSKHV 556 >ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Glycine max] Length = 693 Score = 209 bits (532), Expect = 2e-52 Identities = 94/166 (56%), Positives = 131/166 (78%) Frame = +2 Query: 5 MISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKERD 184 MISGY++ G P EC+ LFNEM+ G++PDLVTVS++L A F+ G +++A +F + ++D Sbjct: 227 MISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKD 286 Query: 185 KVCWTAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDHGKVVHC 364 ++CWT MIVGY QN REEDA M+F +ML +V+PD+YTISS+VS+CA+LASL HG+VVH Sbjct: 287 EICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHG 346 Query: 365 KAVLTGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNVVSWN 502 K V+ G + +LVSSAL+DMY KCG +DA ++F MP+RNV++WN Sbjct: 347 KVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWN 392 Score = 86.7 bits (213), Expect = 2e-15 Identities = 47/162 (29%), Positives = 85/162 (52%) Frame = +2 Query: 17 YLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKERDKVCW 196 Y + G+ + +F+ M + D+ + +++L A + G++E +F M RD V + Sbjct: 68 YAKFGKLSDAQNVFDNMT----KRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSY 123 Query: 197 TAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDHGKVVHCKAVL 376 +I + N AL + M + +P Y+ + + AC++L L HGK +H + V+ Sbjct: 124 NTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVV 183 Query: 377 TGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNVVSWN 502 + V +A+ DMY+KCG++ A ++F M +NVVSWN Sbjct: 184 ADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWN 225 Score = 67.0 bits (162), Expect = 1e-09 Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 35/194 (18%) Frame = +2 Query: 2 SMISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQ----------------- 130 +MI GY +NGR ++ LF +M ++PD T+SS++ + + Sbjct: 292 TMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVM 351 Query: 131 ------------------SGLLEEATRMFRGMKERDKVCWTAMIVGYMQNKREEDALMIF 256 G+ +A +F M R+ + W AMI+GY QN + +AL ++ Sbjct: 352 GIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLY 411 Query: 257 SEMLSEDVRPDNYTISSVVSACARLASLDHGKVVHCKAVLTGFEGDLLVSSALIDMYSKC 436 M E+ +PDN T V+SAC + G+ G L + +I + + Sbjct: 412 ERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRS 471 Query: 437 GEVVDAWIVFGMMP 478 G V A + MP Sbjct: 472 GSVDKAVDLIQGMP 485 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/119 (30%), Positives = 66/119 (55%) Frame = +2 Query: 134 GLLEEATRMFRGMKERDKVCWTAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVV 313 G +++A +F GM +++ V W MI GY++ + + +F+EM ++PD T+S+V+ Sbjct: 204 GDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVL 263 Query: 314 SACARLASLDHGKVVHCKAVLTGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNV 490 +A R +D + + K + D + + +I Y++ G DAW++FG M RNV Sbjct: 264 NAYFRCGRVDDARNLFIKLP----KKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNV 318 >ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g68930-like [Cucumis sativus] Length = 695 Score = 207 bits (528), Expect = 5e-52 Identities = 99/166 (59%), Positives = 130/166 (78%) Frame = +2 Query: 5 MISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKERD 184 MISGY +NG+P++C+ L ++M+ G PD VT+S+I+ A Q G ++EA R+F KE+D Sbjct: 227 MISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKD 286 Query: 185 KVCWTAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDHGKVVHC 364 VCWTAM+VGY +N REEDAL++F+EML E + PD+YT+SSVVS+CA+LASL HG+ VH Sbjct: 287 IVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHG 346 Query: 365 KAVLTGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNVVSWN 502 K++L G +LLVSSALIDMYSKCG + DA VF +MP RNVVSWN Sbjct: 347 KSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392 Score = 99.8 bits (247), Expect = 2e-19 Identities = 52/162 (32%), Positives = 91/162 (56%) Frame = +2 Query: 17 YLRNGRPKECLELFNEMKSLGIQPDLVTVSSILGASFQSGLLEEATRMFRGMKERDKVCW 196 Y + G+ ++ LF++M ++ D + +++L A +SG ++ F M RD V + Sbjct: 68 YAKFGKLRDAQNLFDKM----LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSY 123 Query: 197 TAMIVGYMQNKREEDALMIFSEMLSEDVRPDNYTISSVVSACARLASLDHGKVVHCKAVL 376 I G+ N +++L +F M E P YTI S+++A A+L L +GK +H ++ Sbjct: 124 NTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIV 183 Query: 377 TGFEGDLLVSSALIDMYSKCGEVVDAWIVFGMMPVRNVVSWN 502 F G++ + +AL DMY+KCGE+ A +F + +N+VSWN Sbjct: 184 RNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWN 225 Score = 78.6 bits (192), Expect = 5e-13 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 35/152 (23%) Frame = +2 Query: 2 SMISGYLRNGRPKECLELFNEMKSLGIQPDLVTVSSIL----------------GASFQS 133 +M+ GY +NGR ++ L LFNEM I+PD T+SS++ G S + Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILA 351 Query: 134 GL-------------------LEEATRMFRGMKERDKVCWTAMIVGYMQNKREEDALMIF 256 GL +++A +F M R+ V W AMIVG QN ++DAL +F Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411 Query: 257 SEMLSEDVRPDNYTISSVVSACARLASLDHGK 352 ML + +PDN T ++SAC ++ G+ Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQ 443