BLASTX nr result
ID: Coptis23_contig00037173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00037173
(538 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGD98930.1| NBS type disease resistance protein [Malus x dome... 71 6e-20
ref|XP_002524239.1| conserved hypothetical protein [Ricinus comm... 74 6e-19
emb|CAN80606.1| hypothetical protein VITISV_002648 [Vitis vinifera] 75 5e-18
emb|CAN71249.1| hypothetical protein VITISV_030153 [Vitis vinifera] 73 1e-17
ref|XP_002276742.1| PREDICTED: disease resistance protein RPP13-... 73 1e-17
>gb|AGD98930.1| NBS type disease resistance protein [Malus x domestica]
Length = 878
Score = 71.2 bits (173), Expect(2) = 6e-20
Identities = 30/44 (68%), Positives = 39/44 (88%)
Frame = +2
Query: 173 IQCFLKDADSKQEKDERVRPWVSEIREVAYDVDDVIDTYILKIE 304
+QCFLKDAD+KQE D +VR WVS++R +AYD +D+IDTYILK+E
Sbjct: 39 MQCFLKDADAKQEDDLQVRNWVSDVRNIAYDAEDLIDTYILKVE 82
Score = 51.2 bits (121), Expect(2) = 6e-20
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +1
Query: 316 KRRATSVLNKWKDLRTIGKEITSIQTRLHNISNNRQKYSIIKTGEVISSANESTRRWRRL 495
KR A+++ ++K IGK++ ++TR+ ++S + + Y I TGE S ANE + RR
Sbjct: 93 KRYASTLKARYK----IGKDLVFLRTRISDVSISHEAYGIRSTGEGTSHANEGLLKLRRS 148
Query: 496 LPHMKEDSIVALEE 537
PH ++ IV LEE
Sbjct: 149 TPHGQDKDIVGLEE 162
>ref|XP_002524239.1| conserved hypothetical protein [Ricinus communis]
gi|223536516|gb|EEF38163.1| conserved hypothetical
protein [Ricinus communis]
Length = 985
Score = 74.3 bits (181), Expect(2) = 6e-19
Identities = 33/63 (52%), Positives = 49/63 (77%)
Frame = +2
Query: 110 ENILFAGMRDQVEEMKN*LNWIQCFLKDADSKQEKDERVRPWVSEIREVAYDVDDVIDTY 289
E + +G++++V ++ L I CFLKDAD +Q++DERVR WV+EIR VAYD +DVI+T+
Sbjct: 20 EAVFLSGVKEEVTRLQEELKRILCFLKDADRRQDQDERVRNWVAEIRGVAYDAEDVIETF 79
Query: 290 ILK 298
IL+
Sbjct: 80 ILE 82
Score = 44.7 bits (104), Expect(2) = 6e-19
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +1
Query: 319 RRATSVLNKWKDLRTIGKEITSIQTRLHNISNNRQKYSI--IKTGEVISSANESTRRWRR 492
+R TS++ K + I +I SI+T++ +IS++ Q Y I + E SSA+E +R RR
Sbjct: 96 KRFTSIIKKVPHIHEIRNQIESIRTKICDISSSLQTYDIKFVAKREWSSSASEMQQRLRR 155
Query: 493 LLPHMKEDSIVALE 534
PH +++ +++ +
Sbjct: 156 SYPHDEDEHVISFD 169
>emb|CAN80606.1| hypothetical protein VITISV_002648 [Vitis vinifera]
Length = 1150
Score = 75.1 bits (183), Expect(2) = 5e-18
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = +2
Query: 110 ENILFAGMRDQVEEMKN*LNWIQCFLKDADSKQEKDERVRPWVSEIREVAYDVDDVIDTY 289
E I G+R +VE +K L ++CFL++A+ KQE+D RVR WVSEIRE YDV+D+ID +
Sbjct: 21 EAIFLKGVRGKVERLKKDLGAMKCFLEEAEKKQEEDVRVRNWVSEIREAVYDVEDIIDMF 80
Query: 290 ILKIE 304
IL E
Sbjct: 81 ILNAE 85
Score = 40.8 bits (94), Expect(2) = 5e-18
Identities = 26/74 (35%), Positives = 38/74 (51%)
Frame = +1
Query: 316 KRRATSVLNKWKDLRTIGKEITSIQTRLHNISNNRQKYSIIKTGEVISSANESTRRWRRL 495
KR ++N+ K +GK+I +IQ L +ISN R+ I GE S + + + RR
Sbjct: 94 KRVFKKLINRHK----VGKKIEAIQLHLQDISNRREALGIKNIGEGTSGSGQKLQDLRRS 149
Query: 496 LPHMKEDSIVALEE 537
P +E IV L E
Sbjct: 150 SPRAEERVIVGLTE 163
>emb|CAN71249.1| hypothetical protein VITISV_030153 [Vitis vinifera]
Length = 1728
Score = 73.2 bits (178), Expect(2) = 1e-17
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +2
Query: 110 ENILFAGMRDQVEEMKN*LNWIQCFLKDADSKQEKDERVRPWVSEIREVAYDVDDVIDTY 289
E + +R ++E + L I CFL+ AD+KQE+D RVR WVS+IR+VAYD +DV+D +
Sbjct: 98 EAVFLKDVRPRIERLHRDLRAINCFLEAADAKQEEDPRVRNWVSDIRDVAYDAEDVVDMF 157
Query: 290 ILKIEFQNKK 319
ILK E +K
Sbjct: 158 ILKAEALRRK 167
Score = 41.6 bits (96), Expect(2) = 1e-17
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +1
Query: 334 VLNKWKDLRTIGKEITSIQTRLHNISNNRQKYSIIKTGEVISSANESTRRWRRLLPHMKE 513
V K + L +GK+I +QT L +IS R+ I GE S++ + + RR P ++
Sbjct: 173 VFQKPRCLHNLGKKIDDVQTNLQDISKRREILGIKNIGEGTSTSTQMLQNLRRTTPRAEK 232
Query: 514 DSIVALEE 537
IV L E
Sbjct: 233 HVIVGLNE 240
Score = 73.2 bits (178), Expect(2) = 1e-17
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +2
Query: 110 ENILFAGMRDQVEEMKN*LNWIQCFLKDADSKQEKDERVRPWVSEIREVAYDVDDVIDTY 289
E I +R ++E + L I CFL+ AD+KQE+D RVR WVS+IR+VAYD +DV+D +
Sbjct: 1349 EAIFLKEVRPRIERLHRDLKAINCFLEAADAKQEEDPRVRNWVSDIRDVAYDAEDVVDMF 1408
Query: 290 ILKIEFQNKK 319
ILK E +K
Sbjct: 1409 ILKAEALRRK 1418
Score = 41.2 bits (95), Expect(2) = 1e-17
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 355 LRTIGKEITSIQTRLHNISNNRQKYSIIKTGEVISSANESTRRWRRLLPHMKEDSIVALE 534
L +GK+I IQT LH+IS R+ I G S++++ + RR P ++ IV L
Sbjct: 1431 LHNLGKKIDEIQTNLHDISRRREILGIKNIGVGTSTSSQMLQNLRRTTPRAEKHVIVGLN 1490
Query: 535 E 537
E
Sbjct: 1491 E 1491
>ref|XP_002276742.1| PREDICTED: disease resistance protein RPP13-like [Vitis vinifera]
Length = 933
Score = 73.2 bits (178), Expect(2) = 1e-17
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +2
Query: 110 ENILFAGMRDQVEEMKN*LNWIQCFLKDADSKQEKDERVRPWVSEIREVAYDVDDVIDTY 289
E I +R ++E + L I CFL+ AD+KQE+D RVR WVS+IR+VAYD +DV+D +
Sbjct: 20 EAIFLKEVRPRIERLHRDLKAINCFLEAADAKQEEDPRVRNWVSDIRDVAYDAEDVVDMF 79
Query: 290 ILKIEFQNKK 319
ILK E +K
Sbjct: 80 ILKAEALRRK 89
Score = 41.2 bits (95), Expect(2) = 1e-17
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 355 LRTIGKEITSIQTRLHNISNNRQKYSIIKTGEVISSANESTRRWRRLLPHMKEDSIVALE 534
L +GK+I IQT LH+IS R+ I G S++++ + RR P ++ IV L
Sbjct: 102 LHNLGKKIDEIQTNLHDISRRREILGIKNIGVGTSTSSQMLQNLRRTTPRAEKHVIVGLN 161
Query: 535 E 537
E
Sbjct: 162 E 162