BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037145
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002524455.1| pentatricopeptide repeat-containing protein,...    74   9e-12
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]    73   2e-11

>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/86 (40%), Positives = 56/86 (65%)
 Frame = -1

Query: 291 LSKSCKTLKQLKQILTQIIKTGITNHQSSLSSLLFISATSPHPDLHFASLIFTHIEKANS 112
           L K C T+K L++I   ++KTG+  H  ++S +L   ATSP  D+++A L+FT I   N 
Sbjct: 30  LEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNL 89

Query: 111 FDHNSIIRGFTNGNKPYHALKFYVEM 34
           F  N+IIRGF+  + P+HA+  +++M
Sbjct: 90  FSWNTIIRGFSQSSTPHHAISLFIDM 115


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/86 (45%), Positives = 53/86 (61%)
 Frame = -1

Query: 291 LSKSCKTLKQLKQILTQIIKTGITNHQSSLSSLLFISATSPHPDLHFASLIFTHIEKANS 112
           L  +CKTL+ LKQI +QIIKTG+ N   +LS L+   A SPH DL +A  +F  I   N 
Sbjct: 34  LLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNH 93

Query: 111 FDHNSIIRGFTNGNKPYHALKFYVEM 34
              N +IRG ++   P+ AL++YV M
Sbjct: 94  VIWNHMIRGLSSSESPFLALEYYVHM 119


>ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536243|gb|EEF37895.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
 Frame = -1

Query: 291 LSKSCKTLKQLKQILTQIIKTGITNHQSSLSSLLFISATSPHPDLHFASLIFTHIEKANS 112
           L  +CK LK LKQI +Q+IKTG+ N   +LS L+     SP+ DL +A L+F  I K N 
Sbjct: 30  LLSTCKNLKTLKQIHSQVIKTGLHNTHFALSKLIEFCVISPYGDLSYALLLFKSIGKPNQ 89

Query: 111 FDHNSIIRGFTNGNKPYHALKFYVEM------SRKWVYPF 10
              N+IIRG +    P  A+++YV+M         + YPF
Sbjct: 90  IIWNNIIRGLSLSESPILAIQYYVDMISSGFTPNTYTYPF 129


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/86 (45%), Positives = 55/86 (63%)
 Frame = -1

Query: 291 LSKSCKTLKQLKQILTQIIKTGITNHQSSLSSLLFISATSPHPDLHFASLIFTHIEKANS 112
           L  +CK+ + LKQI +QIIKTG+ N Q +LS L+   A SP  +L +A L+F  IE+ N 
Sbjct: 38  LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQ 97

Query: 111 FDHNSIIRGFTNGNKPYHALKFYVEM 34
           F  N++IRG +  + P  A+ FYV M
Sbjct: 98  FIWNTMIRGNSLSSSPVGAIDFYVRM 123


>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/86 (45%), Positives = 55/86 (63%)
 Frame = -1

Query: 291 LSKSCKTLKQLKQILTQIIKTGITNHQSSLSSLLFISATSPHPDLHFASLIFTHIEKANS 112
           L  +CK+ + LKQI +QIIKTG+ N Q +LS L+   A SP  +L +A L+F  IE+ N 
Sbjct: 38  LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQ 97

Query: 111 FDHNSIIRGFTNGNKPYHALKFYVEM 34
           F  N++IRG +  + P  A+ FYV M
Sbjct: 98  FIWNTMIRGNSLSSSPVGAIDFYVRM 123