BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037123
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]   101   7e-20
ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
emb|CBI28459.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002511099.1| pentatricopeptide repeat-containing protein,...    81   1e-13

>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/97 (52%), Positives = 68/97 (70%)
 Frame = +2

Query: 5   LKHHNWKYLMESSHIPNNINPEIIQLVVQQNKITHLKRLLTFFYWSSTQMGGNKPQNFNS 184
           LK +NWK +M SSHIP+ +NP++I+ V+ QN++   KRLL FFYWS +QMG   PQ  +S
Sbjct: 49  LKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMG--VPQFLDS 106

Query: 185 FSFLAVYLCNAKLYGPANDLLDTFIRAHSPLSAILSS 295
           FS LAV LCN++L+G AN +L   IR     S+IL S
Sbjct: 107 FSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDS 143


>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/97 (52%), Positives = 68/97 (70%)
 Frame = +2

Query: 5   LKHHNWKYLMESSHIPNNINPEIIQLVVQQNKITHLKRLLTFFYWSSTQMGGNKPQNFNS 184
           LK +NWK +M SSHIP+ +NP++I+ V+ QN++   KRLL FFYWS +QMG   PQ  +S
Sbjct: 51  LKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMG--VPQFLDS 108

Query: 185 FSFLAVYLCNAKLYGPANDLLDTFIRAHSPLSAILSS 295
           FS LAV LCN++L+G AN +L   IR     S+IL S
Sbjct: 109 FSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDS 145


>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
 Frame = +2

Query: 2   ILKHHNWKYLMESSHIPNNINPEIIQLVVQQNKITHLKRLLTFFYWSSTQMG-GNKPQNF 178
           +L  HNW+ LMESS IP  +N +II+ V+ QN++   KRLL FFYWS  +MG     Q+ 
Sbjct: 33  LLNSHNWQALMESSDIPKKLNTDIIRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDL 92

Query: 179 NSFSFLAVYLCNAKLYGPANDLLDTFIR-AHSPLSAI 286
           +  S LAV LCN+  YGPA+DL+   IR + SPL+ +
Sbjct: 93  DVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVL 129


>emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
 Frame = +2

Query: 2   ILKHHNWKYLMESSHIPNNINPEIIQLVVQQNKITHLKRLLTFFYWSSTQMG-GNKPQNF 178
           +L  HNW+ LMESS IP  +N +II+ V+ QN++   KRLL FFYWS  +MG     Q+ 
Sbjct: 42  LLNSHNWQALMESSDIPKKLNTDIIRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDL 101

Query: 179 NSFSFLAVYLCNAKLYGPANDLLDTFIR-AHSPLSAI 286
           +  S LAV LCN+  YGPA+DL+   IR + SPL+ +
Sbjct: 102 DVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVL 138


>ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550214|gb|EEF51701.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1151

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/98 (39%), Positives = 66/98 (67%)
 Frame = +2

Query: 2   ILKHHNWKYLMESSHIPNNINPEIIQLVVQQNKITHLKRLLTFFYWSSTQMGGNKPQNFN 181
           +LK  NW++L+ESS +PN +NP+++ LV++QN++   KRL  FF W +++   +  QN +
Sbjct: 51  LLKQKNWQFLIESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRTVFS--QNLS 108

Query: 182 SFSFLAVYLCNAKLYGPANDLLDTFIRAHSPLSAILSS 295
           +FS L++ LCN+ L+G A ++L+  I   +P   IL S
Sbjct: 109 TFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDS 146