BLASTX nr result

ID: Coptis23_contig00037113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037113
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275867.1| PREDICTED: probable protein kinase At2g41970...   135   1e-29
ref|XP_003553436.1| PREDICTED: probable protein kinase At2g41970...   134   2e-29
ref|XP_002308358.1| predicted protein [Populus trichocarpa] gi|2...   131   2e-28
ref|XP_003520542.1| PREDICTED: probable protein kinase At2g41970...   129   5e-28
ref|XP_002534374.1| Serine/threonine-protein kinase PBS1, putati...   129   8e-28

>ref|XP_002275867.1| PREDICTED: probable protein kinase At2g41970 [Vitis vinifera]
           gi|297739815|emb|CBI29997.3| unnamed protein product
           [Vitis vinifera]
          Length = 364

 Score =  135 bits (339), Expect = 1e-29
 Identities = 81/156 (51%), Positives = 96/156 (61%), Gaps = 27/156 (17%)
 Frame = -3

Query: 402 EEENHGPPVNHQYNTAPPKATNHQYGNDRGEPRGS---RSSAPPKILPIETPAISLDELK 232
           EEENHG P N QY TAPP+  N   G   GEPR S   +S AP KILPIETPA+SLDEL 
Sbjct: 8   EEENHGQPAN-QY-TAPPRGGNAYGGGGTGEPRNSNTAKSGAPQKILPIETPAMSLDELN 65

Query: 231 RLTSNFGTKALVGEGSYGRVFSVTLST----VINSF*TKA*A------------------ 118
           RLTSNFG+KAL+GEGSYGRVF   LS+     I    T +                    
Sbjct: 66  RLTSNFGSKALIGEGSYGRVFYAKLSSGEGAAIKKLDTSSSQEPDSDFAAQLSIVSRLTH 125

Query: 117 --FCGIVGLLFGANNRILIYQYATKGSLHDILHGRE 16
             F G++G    A+N+IL+YQ+AT GSLHD+LHGR+
Sbjct: 126 ENFVGLLGYCLEADNKILVYQFATMGSLHDMLHGRK 161


>ref|XP_003553436.1| PREDICTED: probable protein kinase At2g41970-like [Glycine max]
          Length = 365

 Score =  134 bits (336), Expect = 2e-29
 Identities = 77/157 (49%), Positives = 97/157 (61%), Gaps = 27/157 (17%)
 Frame = -3

Query: 405 AEEENHGPPVNHQYNTAPPKA-TNHQYGNDRGEPRGS--RSSAPPKILPIETPAISLDEL 235
           AEEE+ GPP N QY TAPP+  + +  GNDRGEPRG+  +S AP K+LPIE P++ LDEL
Sbjct: 7   AEEESSGPPAN-QYPTAPPRGGSTYGGGNDRGEPRGNVAKSGAPQKVLPIEIPSMPLDEL 65

Query: 234 KRLTSNFGTKALVGEGSYGRVFSVTLS----TVINSF*TKA*A----------------- 118
            RLT NFGTKA +GEGSYGRV+   LS      I    T + A                 
Sbjct: 66  NRLTGNFGTKAFIGEGSYGRVYYAKLSDGTDAAIKKLDTSSSAEPDSDFAAQLSIVSRLK 125

Query: 117 ---FCGIVGLLFGANNRILIYQYATKGSLHDILHGRE 16
              F  ++G    A+NR+L+YQYA+ GSLHD+LHGR+
Sbjct: 126 HDNFVELIGYCLEADNRLLVYQYASLGSLHDVLHGRK 162


>ref|XP_002308358.1| predicted protein [Populus trichocarpa] gi|222854334|gb|EEE91881.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  131 bits (329), Expect = 2e-28
 Identities = 80/156 (51%), Positives = 92/156 (58%), Gaps = 27/156 (17%)
 Frame = -3

Query: 402 EEENHGPPVNHQYNTAPPKATNHQYGNDRGEPRGS---RSSAPPKILPIETPAISLDELK 232
           EEE HGPP N QY TAPP+  N  YG+ RGEPR +   R+ AP K+LPIE PAI LDEL 
Sbjct: 8   EEEPHGPPAN-QY-TAPPRGGN-PYGSGRGEPRSANPARNGAPQKVLPIEIPAIPLDELN 64

Query: 231 RLTSNFGTKALVGEGSYGRVFSVTLS----TVINSF*T--------------------KA 124
           R+T NFGTKAL+GEGSYGRVF   LS      I    T                    K 
Sbjct: 65  RMTGNFGTKALIGEGSYGRVFYAKLSDGMRAAIKKLDTSSSQEPDSDFAAQLSVVSRLKH 124

Query: 123 *AFCGIVGLLFGANNRILIYQYATKGSLHDILHGRE 16
             F  + G    ANNRIL+YQ+A  GSLHD+LHGR+
Sbjct: 125 EHFVELTGYCLDANNRILVYQFAVMGSLHDVLHGRK 160


>ref|XP_003520542.1| PREDICTED: probable protein kinase At2g41970-like [Glycine max]
          Length = 366

 Score =  129 bits (325), Expect = 5e-28
 Identities = 78/158 (49%), Positives = 94/158 (59%), Gaps = 28/158 (17%)
 Frame = -3

Query: 405 AEEENHGPPVNHQYNTAPPKATNHQYG--NDRGEPRGS--RSSAPPKILPIETPAISLDE 238
           AEEE+ G P N QY TAPP+  N   G  NDRGEPRG+  +S AP K+LPIE P++ LDE
Sbjct: 7   AEEESTGSPAN-QYPTAPPRGGNTYGGGGNDRGEPRGNVAKSGAPQKVLPIEIPSMPLDE 65

Query: 237 LKRLTSNFGTKALVGEGSYGRVFSVTLS----TVINSF*T-------------------- 130
           L RLT NFGTKA +GEGSYGRVF   LS      I    T                    
Sbjct: 66  LNRLTGNFGTKAFIGEGSYGRVFYAKLSDGTDAAIKKLDTSSSPEPDSDFAAQLSIVSRM 125

Query: 129 KA*AFCGIVGLLFGANNRILIYQYATKGSLHDILHGRE 16
           K   F  ++G    A+NR+L+YQYA+ GSLHD+LHGR+
Sbjct: 126 KHDNFVELIGYCLEADNRLLVYQYASLGSLHDVLHGRK 163


>ref|XP_002534374.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223525414|gb|EEF28012.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 365

 Score =  129 bits (323), Expect = 8e-28
 Identities = 80/158 (50%), Positives = 93/158 (58%), Gaps = 28/158 (17%)
 Frame = -3

Query: 405 AEEENHGPPVNHQYNTAPPKA-TNHQYGNDRGEPRGS---RSSAPPKILPIETPAISLDE 238
           AEEE  GPP N QY TAPPK   N+  G +R EPR +   +S  P K+LPIE PA+SLDE
Sbjct: 7   AEEELDGPPAN-QY-TAPPKGGNNYAGGGERAEPRSNNPAKSGTPQKVLPIEVPALSLDE 64

Query: 237 LKRLTSNFGTKALVGEGSYGRVFSVTLS----TVINSF*T-------------------- 130
           L RLT NFGTKAL+GEGSYGRVF   L+      I    T                    
Sbjct: 65  LNRLTGNFGTKALIGEGSYGRVFYAKLNNGEEAAIKKLDTSTSQEPDSDFAAQLSVVSRL 124

Query: 129 KA*AFCGIVGLLFGANNRILIYQYATKGSLHDILHGRE 16
           K   F  ++G    ANNRILIYQ+AT GSLHD+LHGR+
Sbjct: 125 KHEHFVELIGYCLEANNRILIYQFATMGSLHDVLHGRK 162


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