BLASTX nr result

ID: Coptis23_contig00037098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037098
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   123   1e-26
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   123   1e-26
gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...   121   5e-26
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 119   3e-25
emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]   115   5e-24

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/89 (64%), Positives = 72/89 (80%)
 Frame = -3

Query: 267  VLSLLNFSVPFEVHIDASKVGIGVVLSQDGKPIAFFSEKLSGAKLNYSTYEMEFYAVIQT 88
            +L L +F   FEV  DAS VGIG VLSQ+G P+AFFSEKL+GAK  YSTY++EFYAV+Q 
Sbjct: 908  ILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQA 967

Query: 87   LKHWCHYLIHAKFVLFSDHEALRYIGSQE 1
            ++HW HYL + +FVL+SDHEALRY+ SQ+
Sbjct: 968  IRHWQHYLSYKEFVLYSDHEALRYLNSQK 996


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/89 (64%), Positives = 72/89 (80%)
 Frame = -3

Query: 267  VLSLLNFSVPFEVHIDASKVGIGVVLSQDGKPIAFFSEKLSGAKLNYSTYEMEFYAVIQT 88
            +L L +F   FEV  DAS VGIG VLSQ+G P+AFFSEKL+GAK  YSTY++EFYAV+Q 
Sbjct: 833  ILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQA 892

Query: 87   LKHWCHYLIHAKFVLFSDHEALRYIGSQE 1
            ++HW HYL + +FVL+SDHEALRY+ SQ+
Sbjct: 893  IRHWQHYLSYKEFVLYSDHEALRYLNSQK 921


>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/89 (65%), Positives = 73/89 (82%)
 Frame = -3

Query: 267 VLSLLNFSVPFEVHIDASKVGIGVVLSQDGKPIAFFSEKLSGAKLNYSTYEMEFYAVIQT 88
           V+ L +FS  FEV  DAS +GIG VLSQ+  PIA+FS KLSGAKLNYSTY+ EFYAV+Q+
Sbjct: 234 VMRLPDFSKVFEVACDASGIGIGGVLSQEKHPIAYFSAKLSGAKLNYSTYDKEFYAVVQS 293

Query: 87  LKHWCHYLIHAKFVLFSDHEALRYIGSQE 1
           L+HW HYL+  +FV++SDHEALRY+ SQ+
Sbjct: 294 LRHWRHYLLPQEFVIYSDHEALRYLNSQK 322


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/88 (64%), Positives = 68/88 (77%)
 Frame = -3

Query: 267  VLSLLNFSVPFEVHIDASKVGIGVVLSQDGKPIAFFSEKLSGAKLNYSTYEMEFYAVIQT 88
            +L+L NF+  FEV  DAS +GIG VL Q+ KPIA+FSEKLSGAKLNYSTY+ EFYA+++ 
Sbjct: 889  ILTLPNFNKLFEVECDASGIGIGAVLVQEHKPIAYFSEKLSGAKLNYSTYDKEFYAIVRA 948

Query: 87   LKHWCHYLIHAKFVLFSDHEALRYIGSQ 4
            L HW HYL    FVL SDHEAL+YI  Q
Sbjct: 949  LNHWSHYLKPRPFVLHSDHEALKYINGQ 976


>emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]
          Length = 372

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/89 (59%), Positives = 70/89 (78%)
 Frame = -3

Query: 267 VLSLLNFSVPFEVHIDASKVGIGVVLSQDGKPIAFFSEKLSGAKLNYSTYEMEFYAVIQT 88
           +L L +F   FEV  DAS VGIG VLSQ+G  +AFFSEKL+GAK  YSTY++EFYA++Q 
Sbjct: 234 ILHLPDFEKVFEVACDASHVGIGAVLSQEGHLVAFFSEKLNGAKKKYSTYDLEFYAMVQA 293

Query: 87  LKHWCHYLIHAKFVLFSDHEALRYIGSQE 1
           ++HW HYL + +F L+SDHEAL+Y+ SQ+
Sbjct: 294 IRHWQHYLSYKEFFLYSDHEALQYLNSQK 322


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