BLASTX nr result

ID: Coptis23_contig00037081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037081
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267624.1| PREDICTED: ATPase family gene 2 protein-like...   265   3e-69
ref|XP_002330900.1| predicted protein [Populus trichocarpa] gi|2...   249   1e-64
ref|XP_002313465.1| predicted protein [Populus trichocarpa] gi|2...   248   3e-64
ref|XP_002512196.1| ATP binding protein, putative [Ricinus commu...   244   4e-63
ref|XP_003531459.1| PREDICTED: uncharacterized protein LOC100783...   243   1e-62

>ref|XP_002267624.1| PREDICTED: ATPase family gene 2 protein-like [Vitis vinifera]
          Length = 516

 Score =  265 bits (677), Expect = 3e-69
 Identities = 126/142 (88%), Positives = 138/142 (97%)
 Frame = -3

Query: 427 SSYLNFVSARAKDFERVSRERRLFTNNGHGSYESGWVSVPFRHPSTFDTLALEPELKEQL 248
           S YL  V++RA++FERVSRERRLFTNNGHGSYESGWVSVPFRHPSTF+TLALEP+L++Q+
Sbjct: 145 SPYLELVTSRAEEFERVSRERRLFTNNGHGSYESGWVSVPFRHPSTFETLALEPQLRQQI 204

Query: 247 TEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANFMCYDVYDLELTKCSD 68
           T+DLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN++CYDVYDLELTK SD
Sbjct: 205 TDDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVSD 264

Query: 67  NSELRALLIQTTNRSIIVIEDI 2
           NSELRALLIQTTNRSIIVIEDI
Sbjct: 265 NSELRALLIQTTNRSIIVIEDI 286


>ref|XP_002330900.1| predicted protein [Populus trichocarpa] gi|222872722|gb|EEF09853.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  249 bits (637), Expect = 1e-64
 Identities = 119/142 (83%), Positives = 134/142 (94%)
 Frame = -3

Query: 427 SSYLNFVSARAKDFERVSRERRLFTNNGHGSYESGWVSVPFRHPSTFDTLALEPELKEQL 248
           S Y+  V++RA++FERVSRERRLFTNNG+ SYESGWVSVPFRHPSTF+TLALEP LK+Q+
Sbjct: 59  SPYIQHVTSRAEEFERVSRERRLFTNNGNASYESGWVSVPFRHPSTFETLALEPHLKKQM 118

Query: 247 TEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANFMCYDVYDLELTKCSD 68
            EDL AFA+G+EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN++CYDVYDLELTK +D
Sbjct: 119 MEDLKAFASGREFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTD 178

Query: 67  NSELRALLIQTTNRSIIVIEDI 2
           NSELRALLIQT+NRSIIVIEDI
Sbjct: 179 NSELRALLIQTSNRSIIVIEDI 200


>ref|XP_002313465.1| predicted protein [Populus trichocarpa] gi|222849873|gb|EEE87420.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  248 bits (634), Expect = 3e-64
 Identities = 118/142 (83%), Positives = 134/142 (94%)
 Frame = -3

Query: 427 SSYLNFVSARAKDFERVSRERRLFTNNGHGSYESGWVSVPFRHPSTFDTLALEPELKEQL 248
           S YL  V++RA++FERVSRERRLFTNNG+ SYESGWVSVPFRHPSTF+TLALEP+LK Q+
Sbjct: 126 SPYLQHVTSRAEEFERVSRERRLFTNNGNASYESGWVSVPFRHPSTFETLALEPQLKRQI 185

Query: 247 TEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANFMCYDVYDLELTKCSD 68
            EDL AFA+G+E+YHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN++CYDVYDLELTK +D
Sbjct: 186 MEDLKAFASGREYYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTD 245

Query: 67  NSELRALLIQTTNRSIIVIEDI 2
           NS+LRALLIQT+NRSIIVIEDI
Sbjct: 246 NSDLRALLIQTSNRSIIVIEDI 267


>ref|XP_002512196.1| ATP binding protein, putative [Ricinus communis]
           gi|223548740|gb|EEF50230.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 517

 Score =  244 bits (624), Expect = 4e-63
 Identities = 117/140 (83%), Positives = 132/140 (94%)
 Frame = -3

Query: 421 YLNFVSARAKDFERVSRERRLFTNNGHGSYESGWVSVPFRHPSTFDTLALEPELKEQLTE 242
           YL  V++RA++FERVSRERRLFTNNG+ S+ESGWVSVPFRHPSTF+TLALEP+LK+Q+  
Sbjct: 150 YLQHVTSRAEEFERVSRERRLFTNNGNASHESGWVSVPFRHPSTFETLALEPQLKKQIMG 209

Query: 241 DLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANFMCYDVYDLELTKCSDNS 62
           DL AF+NGK FYHRVGRAWKRGYLL+GPPGSGKSSLIAAMAN++CYDVYDLELTK +DNS
Sbjct: 210 DLKAFSNGKAFYHRVGRAWKRGYLLHGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNS 269

Query: 61  ELRALLIQTTNRSIIVIEDI 2
           ELRALLIQTTNRSIIVIEDI
Sbjct: 270 ELRALLIQTTNRSIIVIEDI 289


>ref|XP_003531459.1| PREDICTED: uncharacterized protein LOC100783574 [Glycine max]
          Length = 516

 Score =  243 bits (620), Expect = 1e-62
 Identities = 121/144 (84%), Positives = 133/144 (92%), Gaps = 2/144 (1%)
 Frame = -3

Query: 427 SSYLNFVSARAKDFERVSRERRLFTNN--GHGSYESGWVSVPFRHPSTFDTLALEPELKE 254
           S YL  V++RA++FERVSRERRLFTNN    GS+ESGWVSVPFRHPSTF+TLALEPELK+
Sbjct: 147 SPYLAHVTSRAEEFERVSRERRLFTNNTTASGSFESGWVSVPFRHPSTFETLALEPELKK 206

Query: 253 QLTEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANFMCYDVYDLELTKC 74
           Q+  DLTAFA+GKEFY RVGRAWKRGYLL+GPPGSGKSSLIAAMANF+CYDVYDLELTK 
Sbjct: 207 QIKNDLTAFADGKEFYKRVGRAWKRGYLLHGPPGSGKSSLIAAMANFLCYDVYDLELTKV 266

Query: 73  SDNSELRALLIQTTNRSIIVIEDI 2
           SDNSELR+LLIQTTNRSIIVIEDI
Sbjct: 267 SDNSELRSLLIQTTNRSIIVIEDI 290


Top