BLASTX nr result

ID: Coptis23_contig00037065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037065
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG75111.1| transcription factor MYB811 [Fagus crenata]            58   7e-07

>dbj|BAG75111.1| transcription factor MYB811 [Fagus crenata]
          Length = 566

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
 Frame = -2

Query: 349 KESTVEINNSVEDDDLSSLLNILPSSMMVSDLYNEGAETSNGQSS-VTDDGIGLDRQHVP 173
           +ES V++NN  ED  LS LLN+  +  + +D Y++  E SNGQSS VTD+ IG+D QH+ 
Sbjct: 482 EESGVQMNNMQED--LSKLLNV--NMQIPTDWYSDSGEVSNGQSSGVTDENIGIDMQHIA 537

Query: 172 XXXXXXXXTAMDQDWTIG--AWNNLPEMC 92
                   T  +   T G  +W+NLP +C
Sbjct: 538 SLFPLAATTDHNHSRTTGSCSWDNLPGIC 566


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